ENST00000444326.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000444326.1

Source

Gencode19

Same with

lnc-ANKS4B-1:3,NONHSAT140973

Classification

intergenic

Length

2028 nt

Genomic location

chr16+:21314568..21329912

Exon number

3

Exons

21314568..21314778,21327205..21327291,21328183..21329912

Genome context

Sequence
000001 GCTCTAAGAA AAGAAAGTTT TGGGCCTAGA GTCAGGAAAA AGCCTTTTCA AGTCAAGCTG AGAACTTTAA GGTGGTCTTG 000080
000081 GCTACCTCAT TTTATGCAAA GTAGGCAGAA AATTTAAAAG AAAAGAAACA TATTTAAGTA CAATTAAGAA AATTACAGTG 000160
000161 TTTCAGTTAA AGCAGTTCAG TGCTTTTTAG AAAAGGAGCT GAAATTAAAT AAGTTGAACT TCCTCTCTTT TTAGAAGAAT 000240
000241 GGATTTCTCG GAGTCTGAAA AATTTATGGT TCTTCTCTGG AAGAATTTTA TTTTAAAGAG GCGGCGATGT ATTGCTTTAG 000320
000321 TTGTGGAAAT GGTCCTCACA TTTCTGTTTA GTGCTGCGCT TTTGGCAACA CGCTCTGTTA TTACTATAAA TAAGAACGGA 000400
000401 CCTTTCGATT TTGCTGCTCA GCCTGTCGAT GAAGTGCCTT TCTACATCAC AGCTTCCTTA ATTTCTCCTT CTCCTTTGGA 000480
000481 ATTGGCTTAC GTGCCTTCCA GAAGTACTGT GGTTCAGGGT ATTATTGAAA GAGTGAAAAT GGATTTAAAC CCTCAAATGA 000560
000561 AAGGTTAGAA ATTAACATTT TCTGAAAAAA CATACAGAAT TACTAAATCG ATTTAGTGAA GACATACTTA CAACCTTATT 000640
000641 AACTGGTTCT TAACCTCCCA AGTAAAACAT CGTTGGAATC CTCATACTAA GTATAAATAT TATGGACTTT GTTAAACTTG 000720
000721 AAAGTTAAAT TTATATAAAA TATTTTGTTC ATAGAGCCCA GAACAAATAG TAATATTTCA AAATGAGATG ACCAATTATT 000800
000801 ATTATTATTC TAAGTTGTTA TCCAGTTTTG TGATACTGTT TTTTCTATCT GGTTGTGCTT CTTGAACCTG GGTAAGTATA 000880
000881 CCTCCAGGGG TGTGTGATTT TGTGCCACAG GTCAGTGGTC AGTTATTTAA AATAATGTTT TATATTAAAA TGTGGTGTGA 000960
000961 GTAATATAGG AAGGCTTTAG AAAACACTTA AGCTATGTAG AATTATTTTA AAAGCCCTCA GTCTCTCACT TACCTTCATA 001040
001041 TTCCCGGATC AGTTTCTTAC CTCTTTCTCT TAGAGGTAAA TACTGTGAGA AGTTTAGGTC GGCCGGGCCC AGTGGCTCAC 001120
001121 GCCTGTAATC CCAGCATTTT GGGAGGCTGA GGTGGGCAGA TCACCTGAGG TCAGGAGTTC AAGACCAGCC TGGCCAACAT 001200
001201 GGCAAAACCC CATCTCTACT AAAAATATAA GAATTAGCCA GACATGGTGG TATGCACCTA TAGTCCCAGC TACTTGGGAG 001280
001281 GCTGAGGCAT GCGAATTGCT TGAACCCAGG AGGAGGAGGA GGTTGCAGTG AGGTGAAATT GCACCACTGC ACTCCAGCCT 001360
001361 GGGTGACAGA CCAAGACTCT GTCTCAAAAA AAAAAAAAAA AAAGTTTGTG GGCATCTCCC TAGCACACCT CTCTCTACAC 001440
001441 ATGTGCGTGC ATGTGCACAC ACACACACAC ACACACACAC ACACACAGTC AGGCAACTTT TCCATCTTTT TTTGTCTTTC 001520
001521 AAGAGATATG AGAGTCCTTG AGAGTAGATG CCATCTCAAA GCATTCTTTT TTGTTGTTTG CTTTTTTTTA TCAAAGCATT 001600
001601 CTTTAAAATA AAGACTGAAA CAGGAGAATA TGAAGTTCCC AGTAATTTTT AAATTCTACA ACAAAAATAT CTCAACAAAT 001680
001681 TTAAAGTCTA TTATGGGTTA CTCCAATAGT CGCTTTGGGT TACTCAAAAT ATTTTCTGAT TTCCACTCTG ATGTCTTCTT 001760
001761 TGATGCATGG AATTTCAAAA TTTTTAGAAA TGTGTTGCTG AACTTCCAAA CACTGGGGGC TTCTTATCTT TCTGTTGTTG 001840
001841 ATTTCTGTTT TAATTTCCTT TCATCAGAGA GTATACTCAA TTCCAGTTCT TTGACATTTT GAGAACTGTT TATGACTAGT 001920
001921 ACATGGTATA TTTTGATAAA TGTTTTCTGT GAATTTGTAA AAACTATGTG TGCTATAGGT TTTGCTTCTG GTGTTCTATA 002000
002001 AATGCCACCT GGGCAAAGTT GGCTAAGT
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Predicted Small Protein

Name ENST00000444326.1_smProtein_1547:1651
Length 35
Molecular weight 3979.6797
Aromaticity 0.205882352941
Instability index 51.9411764706
Isoelectric point 5.98065185547
Runs 5
Runs residual 0.0390915860015
Runs probability 0.0274863098393
Amino acid sequence MPSQSILFCCLLFFIKAFFKIKTETGEYEVPSNF
Secondary structure LLLHHHHHHHHHHHHHHHHHHHLLLLLEEELLLL
PRMN -
PiMo -