ENST00000444326.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000444326.1 |
Source |
Gencode19 |
Same with |
lnc-ANKS4B-1:3,NONHSAT140973 |
Classification |
intergenic |
Length |
2028 nt |
Genomic location |
chr16+:21314568..21329912 |
Exon number |
3 |
Exons |
21314568..21314778,21327205..21327291,21328183..21329912 |
Genome context |
|
Sequence |
000001 GCTCTAAGAA AAGAAAGTTT TGGGCCTAGA GTCAGGAAAA AGCCTTTTCA AGTCAAGCTG AGAACTTTAA GGTGGTCTTG 000080
000081 GCTACCTCAT TTTATGCAAA GTAGGCAGAA AATTTAAAAG AAAAGAAACA TATTTAAGTA CAATTAAGAA AATTACAGTG 000160 000161 TTTCAGTTAA AGCAGTTCAG TGCTTTTTAG AAAAGGAGCT GAAATTAAAT AAGTTGAACT TCCTCTCTTT TTAGAAGAAT 000240 000241 GGATTTCTCG GAGTCTGAAA AATTTATGGT TCTTCTCTGG AAGAATTTTA TTTTAAAGAG GCGGCGATGT ATTGCTTTAG 000320 000321 TTGTGGAAAT GGTCCTCACA TTTCTGTTTA GTGCTGCGCT TTTGGCAACA CGCTCTGTTA TTACTATAAA TAAGAACGGA 000400 000401 CCTTTCGATT TTGCTGCTCA GCCTGTCGAT GAAGTGCCTT TCTACATCAC AGCTTCCTTA ATTTCTCCTT CTCCTTTGGA 000480 000481 ATTGGCTTAC GTGCCTTCCA GAAGTACTGT GGTTCAGGGT ATTATTGAAA GAGTGAAAAT GGATTTAAAC CCTCAAATGA 000560 000561 AAGGTTAGAA ATTAACATTT TCTGAAAAAA CATACAGAAT TACTAAATCG ATTTAGTGAA GACATACTTA CAACCTTATT 000640 000641 AACTGGTTCT TAACCTCCCA AGTAAAACAT CGTTGGAATC CTCATACTAA GTATAAATAT TATGGACTTT GTTAAACTTG 000720 000721 AAAGTTAAAT TTATATAAAA TATTTTGTTC ATAGAGCCCA GAACAAATAG TAATATTTCA AAATGAGATG ACCAATTATT 000800 000801 ATTATTATTC TAAGTTGTTA TCCAGTTTTG TGATACTGTT TTTTCTATCT GGTTGTGCTT CTTGAACCTG GGTAAGTATA 000880 000881 CCTCCAGGGG TGTGTGATTT TGTGCCACAG GTCAGTGGTC AGTTATTTAA AATAATGTTT TATATTAAAA TGTGGTGTGA 000960 000961 GTAATATAGG AAGGCTTTAG AAAACACTTA AGCTATGTAG AATTATTTTA AAAGCCCTCA GTCTCTCACT TACCTTCATA 001040 001041 TTCCCGGATC AGTTTCTTAC CTCTTTCTCT TAGAGGTAAA TACTGTGAGA AGTTTAGGTC GGCCGGGCCC AGTGGCTCAC 001120 001121 GCCTGTAATC CCAGCATTTT GGGAGGCTGA GGTGGGCAGA TCACCTGAGG TCAGGAGTTC AAGACCAGCC TGGCCAACAT 001200 001201 GGCAAAACCC CATCTCTACT AAAAATATAA GAATTAGCCA GACATGGTGG TATGCACCTA TAGTCCCAGC TACTTGGGAG 001280 001281 GCTGAGGCAT GCGAATTGCT TGAACCCAGG AGGAGGAGGA GGTTGCAGTG AGGTGAAATT GCACCACTGC ACTCCAGCCT 001360 001361 GGGTGACAGA CCAAGACTCT GTCTCAAAAA AAAAAAAAAA AAAGTTTGTG GGCATCTCCC TAGCACACCT CTCTCTACAC 001440 001441 ATGTGCGTGC ATGTGCACAC ACACACACAC ACACACACAC ACACACAGTC AGGCAACTTT TCCATCTTTT TTTGTCTTTC 001520 001521 AAGAGATATG AGAGTCCTTG AGAGTAGATG CCATCTCAAA GCATTCTTTT TTGTTGTTTG CTTTTTTTTA TCAAAGCATT 001600 001601 CTTTAAAATA AAGACTGAAA CAGGAGAATA TGAAGTTCCC AGTAATTTTT AAATTCTACA ACAAAAATAT CTCAACAAAT 001680 001681 TTAAAGTCTA TTATGGGTTA CTCCAATAGT CGCTTTGGGT TACTCAAAAT ATTTTCTGAT TTCCACTCTG ATGTCTTCTT 001760 001761 TGATGCATGG AATTTCAAAA TTTTTAGAAA TGTGTTGCTG AACTTCCAAA CACTGGGGGC TTCTTATCTT TCTGTTGTTG 001840 001841 ATTTCTGTTT TAATTTCCTT TCATCAGAGA GTATACTCAA TTCCAGTTCT TTGACATTTT GAGAACTGTT TATGACTAGT 001920 001921 ACATGGTATA TTTTGATAAA TGTTTTCTGT GAATTTGTAA AAACTATGTG TGCTATAGGT TTTGCTTCTG GTGTTCTATA 002000 002001 AATGCCACCT GGGCAAAGTT GGCTAAGT |
Predicted Small Protein
Name | ENST00000444326.1_smProtein_1547:1651 |
Length | 35 |
Molecular weight | 3979.6797 |
Aromaticity | 0.205882352941 |
Instability index | 51.9411764706 |
Isoelectric point | 5.98065185547 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0274863098393 |
Amino acid sequence | MPSQSILFCCLLFFIKAFFKIKTETGEYEVPSNF |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHLLLLLEEELLLL |
PRMN | - |
PiMo | - |