ENST00000444795.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000444795.1

Source

Gencode19

Same with

lnc-ERCC5-2:1,NONHSAT035028

Classification

intergenic

Length

492 nt

Genomic location

chr13+:104077550..104080035

Exon number

2

Exons

104077550..104077671,104079666..104080035

Genome context

Sequence
000001 AGTCTTTGTA AAAGTGACGT GAAGAGATTT TCATGTTGGA AAGATGACTA ACTGCATCGT AGAATTAATG TGAAAGGGTG 000080
000081 GCCCAAGGAA GCAAGTTTCT TCACAGCTAT TGCAATAAAC AGGGTCTACT GGAGACCTTG GCTTTTTATT TCCCTGACAC 000160
000161 AACTTCACAC TGCTGGAGCA ATGCTTGGAT TGCTCTGGAA ACACTGGCAA ATCTCAAGAT GCAGTTCAGG CTTCTCCATG 000240
000241 ATGAGTGTGA GTCCCTAGGC TGTCTCTCAA ACTAAAGATT CCCCAGCCAG GCAACTCTAA AGAGTCTTCG ACAAGGCAAC 000320
000321 ACAATTACTC TGTGTGCTTA GAAGAAGAGG GGTCATAAAT GTCAGCTGTT GCTCTTTGAG TCCTGCTAAT TCATTCATTG 000400
000401 ATTCACTCAT CTTTCCCACA GGCATGTGCT GTGCGTTTAC TGTACTGCAT GACACTGTGG AGGTTATAAA GAAATAAAAT 000480
000481 ATTTGGGGCT TA
[back to top]

Predicted Small Protein

Name ENST00000444795.1_smProtein_218:274
Length 19
Molecular weight 2095.3794
Aromaticity 0.0555555555556
Instability index 46.8777777778
Isoelectric point 4.64935302734
Runs 4
Runs residual 0.0438596491228
Runs probability 0.0451775304718
Amino acid sequence MQFRLLHDECESLGCLSN
Secondary structure LLEEEHHHHHHHHLLLLL
PRMN -
PiMo -