ENST00000445070.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000445070.1

Source

Gencode19

Same with

lnc-FOXD2-3:1,NONHSAT003103

Classification

intronic(AS)

Length

1807 nt

Genomic location

chr1+:48283738..48285909

Exon number

2

Exons

48283738..48283887,48284253..48285909

Genome context

Sequence
000001 GCATAAGGGG GCCTTTCAGC CGGCTTCAGG GGGCGGCCAG GCGGGCAGGC GTTGCGGGGG ACCGGCTCTG CCCCAGGCCT 000080
000081 GCCAGTATGG CCTGGCACCC ATGGGATGGA GGGCTGGGAG GCCCTGGTTG ACCTCTGGCT TGGACTCTGG GTTTGATGAA 000160
000161 GAGTTCCAGC GGAAGCATCA GCCAGTCATT AATTCCAGGG GAGGGTGCAC GTGGAACCAG AAGGGGTGGC TGGCCAGGCA 000240
000241 GGAGGCTGTC CCTCACCAGG GAGAGGAAAG AGCGCTCCTC TCTCCAGCCT TGCTGTGGCC TTTAACTTGC TTCACTGGGT 000320
000321 GTCCAGAATC ACAGGCGGGT GGAATGACAG CAGTTTGAAT GACACCTGGT AGGCAGACAG TTTGGTATTG AAGTGCTGGG 000400
000401 ATTTCACATC CTCTGGGTTG TCTCGCTGTG GCTCCGATGC CTTTGACGTG AACAGCTCAC AAGTCCATCA CTCGCATTCT 000480
000481 GTGGCGTCTG GCCATCTCCC AATTTGGAGT TTCTGATTCT GTGGTTAGAC CTTATGTTTC CAGGGCCTGG GCTTTTCATT 000560
000561 CTTTCTAATT TTTTAAAAAT GTATGATTAT TGTCTAGAGA CATTATTTTT AAAAAGTATA AACCATCCCA GTGCTGACAA 000640
000641 GCCTGTTGTG GGGAGGACTC AGCGTGATAA GGCATCTCAG GGTGCTGGCA TTTAGCCTCC AATACAATCT AGCAGGGCTA 000720
000721 GGGCACAGGG CCAGCGGCCA CCCTGCAGGC TCACAGGGAC AGGATTCCGC TCTGCAGTTA GCCCCAAGGA TGGGACTCTC 000800
000801 CAGCACTTTT CCCTCCAGTC GCTCCAGGGC GGGAGGATCA CGGCCCATGC CAGTGGAGTG TAAGGAACCC CCTGGAAAAG 000880
000881 CGGGGCGCTT GAATATCCTG AGTGTTTGGT CTGCAGTCAC CAACACATCG CTTTCCTGGA TCTGATTTTA TTTATTTTGA 000960
000961 TTGGATCTTT AACAGCTCTT TACAAGGCTG AAACCGAAGC CGCCTGAGGT CCCCAGGAGG CTTGCTAAAA CTTCAACTGC 001040
001041 ACCCAGTTTA GCAGAGCAAC TTGAAAGTTA ATCAGCGGTG AGGGACAATT TGCCTCATTA TTTCCAGCCC TGGAATTTGG 001120
001121 CGGCAGATGG AATTTGGGGC CTGGTGTGGA CACGGCAATG AACACAGCAA GGACTGTCGC CCCTTGGTAT GGCCTTGTGG 001200
001201 GGTCTGGGCC TGGATGGGCT GATACTCCCT CTGAAGACGG GCGGTGCCGG GAAGGATTTC CCACTTGAGA GAACAAGGGC 001280
001281 AATCAGGCTG CCCTATCTCA GGTCCAGGCC AGTGTGGAGT AATCCTTAGA TACACAGTTC TGAGCACGTA TTCGGGCTGA 001360
001361 ACCCTGCACT GGATTCTGGG GAAACAAGAG TGGAATCCGA TACAGTTGCA TCCAATATAG GACGCAGACC AGAGACACTG 001440
001441 GGGTAAATTC TCACAGGAGA GGAACACCTG TGGCTGGCAC CTTCTGCATG AATCTGCGAA AAACAAATCT GCCCCACTTG 001520
001521 CCCTCACTTT CTCAATAAGG TCCACTCAGA CCCTTGACTT TAATGTTAAC CCCCTCCCAG GCACTCCCAC CTCCACACTC 001600
001601 TGCCATACTC TCCACAGCAC ATAGCACTGA CCACCTTCTA ACACACTATG TTAGTTCCTC ACTTATCATG TTTATTGTTT 001680
001681 ATCACATCAC CTTCCACAGG AAGGTAAGAC CCTCCTTCCA TGAGGGCAGG AATGTTTGTT TTGTTCATTA GTCTATCTCC 001760
001761 AGCCCCAGCA CATATGATGC ACTCAATAAA TGTCGTGTGA ACAAATG
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Predicted Small Protein

Name ENST00000445070.1_smProtein_1562:1750
Length 63
Molecular weight 7064.0987
Aromaticity 0.0967741935484
Instability index 55.7241935484
Isoelectric point 9.18768310547
Runs 10
Runs residual 0.00764976958525
Runs probability 0.0353559441795
Amino acid sequence MLTPSQALPPPHSAILSTAHSTDHLLTHYVSSSLIMFIVYHITFHRKVRPSFHEGRNVCF
VH
Secondary structure LLLLLLLLLLLLLEEELLLLLLLLHHHEEELLLEEEEEEEEEEEEEEELLLLLLLLEEEE
EL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL
LL
PiMo ooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiii
ii