ENST00000445389.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000445389.1

Source

Gencode19

Same with

lnc-EFR3B-3:5,NONHSAT069629

Classification

intergenic

Length

571 nt

Genomic location

chr2+:25194995..25250386

Exon number

4

Exons

25194995..25195101,25224284..25224414,25226854..25226979,25250180..25250386

Genome context

Sequence
000001 GACGTCATCT GCAGGCCCTG GAGACGCGAC TGCAGTTACC GAGTTTCTAA GGCCTCGTCC CCTGACGGGA AGGCGGCGTT 000080
000081 GGGGGGCGGC TGGGTTTACC CTTCGAGAGT CCGTGTGAGA ACCGGGACAC CTGTCCTGTT GAAAAGGGGG ACGCAAAAGC 000160
000161 TGAAAATGCC CGGAAGGATA TGGCTTCCTT GAACTGCGGG ACGTGTAGCT GCAGCTGTGG GGTGGACCAT GGAAACAGGT 000240
000241 AGGAACTCTC TGCTGAGTGG CAGATGGCCT TGGGCAGCGA TGAGTATTAC ATTGTTTTCC CTGCGTGTCT TTCCCGTCAG 000320
000321 CTCCATCAGA AGTACCAGGG AGGACTCTGA CAGGCCTGGC CTGGGAGTTA GAAAACACCA GGAAAAGGGT TGTTCCCACC 000400
000401 TGGAAGAGAA ATGCTAGAGC AACACACCAT CTTCCTCAAC ATTATCATCT GTCTCTGGAT GACAATGAAA TTCACAGGAC 000480
000481 ACTGATTGTC TTTTTATCCC ATTGGACATC GTGATAGTCT ACAATACTGA TAACACCATG ATGATAGGAT CTGAAGACCT 000560
000561 GGAAGTACCA G
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Predicted Small Protein

Name ENST00000445389.1_smProtein_263:349
Length 29
Molecular weight 3188.6324
Aromaticity 0.142857142857
Instability index 69.9178571429
Isoelectric point 6.50091552734
Runs 5
Runs residual 0.0246478873239
Runs probability 0.0320614732379
Amino acid sequence MALGSDEYYIVFPACLSRQLHQKYQGGL
Secondary structure LLLLLLEEEEEELHHHHHHHHHHHHLLL
PRMN -
PiMo -