ENST00000445389.1
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000445389.1 |
Source |
Gencode19 |
Same with |
lnc-EFR3B-3:5,NONHSAT069629 |
Classification |
intergenic |
Length |
571 nt |
Genomic location |
chr2+:25194995..25250386 |
Exon number |
4 |
Exons |
25194995..25195101,25224284..25224414,25226854..25226979,25250180..25250386 |
Genome context |
|
Sequence |
000001 GACGTCATCT GCAGGCCCTG GAGACGCGAC TGCAGTTACC GAGTTTCTAA GGCCTCGTCC CCTGACGGGA AGGCGGCGTT 000080
000081 GGGGGGCGGC TGGGTTTACC CTTCGAGAGT CCGTGTGAGA ACCGGGACAC CTGTCCTGTT GAAAAGGGGG ACGCAAAAGC 000160 000161 TGAAAATGCC CGGAAGGATA TGGCTTCCTT GAACTGCGGG ACGTGTAGCT GCAGCTGTGG GGTGGACCAT GGAAACAGGT 000240 000241 AGGAACTCTC TGCTGAGTGG CAGATGGCCT TGGGCAGCGA TGAGTATTAC ATTGTTTTCC CTGCGTGTCT TTCCCGTCAG 000320 000321 CTCCATCAGA AGTACCAGGG AGGACTCTGA CAGGCCTGGC CTGGGAGTTA GAAAACACCA GGAAAAGGGT TGTTCCCACC 000400 000401 TGGAAGAGAA ATGCTAGAGC AACACACCAT CTTCCTCAAC ATTATCATCT GTCTCTGGAT GACAATGAAA TTCACAGGAC 000480 000481 ACTGATTGTC TTTTTATCCC ATTGGACATC GTGATAGTCT ACAATACTGA TAACACCATG ATGATAGGAT CTGAAGACCT 000560 000561 GGAAGTACCA G |
Predicted Small Protein
Name | ENST00000445389.1_smProtein_263:349 |
Length | 29 |
Molecular weight | 3188.6324 |
Aromaticity | 0.142857142857 |
Instability index | 69.9178571429 |
Isoelectric point | 6.50091552734 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0320614732379 |
Amino acid sequence | MALGSDEYYIVFPACLSRQLHQKYQGGL |
Secondary structure | LLLLLLEEEEEELHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |