ENST00000445433.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000445433.1

Source

Gencode19

Same with

lnc-AL353997.5.1-1:1,NONHSAT146367

Classification

intergenic

Length

2333 nt

Genomic location

chr17+:18319042..18328409

Exon number

8

Exons

18319042..18319175,18320884..18320962,18323647..18324330,18325495..18326127,18326264..18326378,18326627..18326863,18327803..18327951,18328108..18328409

Genome context

Sequence
000001 TTAAATGTCT TGAGATTTAA AAAGATGTTT TGTAGTTATA CTCAAGCTTG GAACCATAGT GACCAACTGT TACGGACAGA 000080
000081 CTGGATTGTA TCCCCTTCCA ATTAAGTTAC GGTGCTGCTA CAGAAAGAAA AGAGGTTGAG ACTGAGCTAC AGTTAATCTG 000160
000161 TGGCGACGTG CTGGATGCAC TGGACAAACA CCTCATTCCA GTAGCTGACA CTGAAGTTGA ACTAATTGAC ACCTACCACC 000240
000241 GCTTGCTGGA GGTTGAGGAC GCCCAGTGAG TGTGCACCCG GGCTGGAGAA GGCAGGAGGT ATGGCCCGGA AAAGAGACAC 000320
000321 AGAAAGGTAA TCCAAGAGGG CTTTCTGGAG GAGGTGGCAG CTGAGCCTAG AGGTGAATTT CGTTGGGGAA GAGGGAGTGA 000400
000401 GGCCTAGGCA GCTTAGGCCA TGACCCCCAT AGTGGGAGAC GGCTGCATAA GGGTCTCTCT CCTGGCATCC GTCTTTACCC 000480
000481 ATGCCTGGGC ATCCTACCCC CATCACCCTT TAACCCCCGA GGGCCTTGGC TGGGTCCCAG AAATTCCCAG GAGGGTCAGA 000560
000561 GAAGACCACG GGGACTCTCA TCACCCCCAC CCTGGCTCAC TTCCAAAAAG GCTGCAAGAA GGATGTTGGA GGGTCTCCTG 000640
000641 GAGGCCGCCA AGGGCATTTT CTCATGGAGC CCACGTCTCT CCCCGATCGT GGTGGCTGTG ATCGGTAATT CCAGCTTCAT 000720
000721 ACTGGCTACA GGTGGATGAT GCCCACCTGG CTGCCGATGA CTTCTGCACC AAGTGAGGCT GGGTCTCTGG AGCTGCCCCA 000800
000801 GGGGCTGGAC AAGCTGACCC TGCCTGGAGC CAACCTGGAG ATGCAGCCTG AGAACCTCAA GGAGGACCTG GTCTACCTGA 000880
000881 AGAAGAACCA TGAGGAGGAA ATGAACGCCC TTTGAGGTCA GGTGGACAAG GATGTCAGTG TGAAGATGGA CACTGTGCCT 000960
000961 GGAGTGAACC TGAGCTGCAT CCTGAATGAG ATGCGTGACC AGGACAAGAA ACTGGTGGAG AAGAGCTGCA AGGATGCCCA 001040
001041 GGGCTGGTTC TTCAGCGTGG TGGGTGGCCG TGTGTAAGCA GGTGTGCACA CGTGTGGGCA CATACGCCGT GTGCTGGTGC 001120
001121 AGTTGGAACA CCGGCAGATT CACAGGCTGT CCCAGTTGGA AGGACTTTTG GAAACCAGTC GGACCAGCCC TTCATGTCTT 001200
001201 CGATGTAAAA TGTGAGGCTC AGAGAGGACT CAAGCTCACA CAGCCCTTCA CTGTGGCCTG CAAAATAGAT CCCGTTCTCT 001280
001281 GCAAGTCTGG TCTTGGGTTT CCACCACAGC TGTTTACAGG ATGTGTGTAT TTGAGTACAT ACACATACCC TTGGCAAGCA 001360
001361 CAGGCTGAGT GTGTCCGGTG TCCTAGGGAC AGCAACAGGT GCAAAAGAAT AACACCCAGT GCCTGTCTTT GAGGTGCTGT 001440
001441 AGTTCGGTAG GAGTAAGAAA TGCAAACGAC CGCAGAGCAG GTTGAATTCC TCCAAGGTCC AACATGGGTG CAGAGAGTCT 001520
001521 TTGTGTGCAG AGAGAGGGGC TGAACTGCAA GGTGGCCACC AACACAGAGG CCCTGCAGAG CGGCAGGATG GAGATGTGGA 001600
001601 GCTCTACATC TCTGTGCAGA ACCTGAGCCG TCCCAGCTCA GCAAGAAAGC ATCGCTGGAG GGCAGCCTGG TGGAGACGGA 001680
001681 GGTGTGTTAC AGGACCCAGC TGGCCCAGCT GCAGGGGCTC ATCAGAAGCA TGGAACAGCA GCTGTGCGAG CTCTGCTGTG 001760
001761 ATGCAGAGCA CCAGGACCAC GAGCACCAGG TCCTTCTGGA CGTGAAGACG CGGCTGGAGC AGGAGATCGC CACCTACAGC 001840
001841 CGCTTGCTAG AGGTTGAGGA CGCCCAGTGA GTGTGCACCC AGGGGAACCT CCTCTGCCAG GGCCTGCTTC TCCCCAGCAG 001920
001921 TGCTTGCAGG GGCCTGGGCT GGCTGGCATC CCTGGGTCGA TGGGTGCTCC TCTCCCTGCA GGCTGGCCAC TCAGTACTCC 002000
002001 TTGTCCCTGG CCTCGCAGCC CACCTGGGAA GCCACAGTGA CCAGCCACCA GGTGTGCCAT CGTGGAGGAA GTCCAGGTTG 002080
002081 GAGAGGTGGT CTTCTGTAAG CAGGTCCATC TCTCCACCCA CTGAGGCCCC TTTCTGCCTG TGACAGCCCC ACCTCGAGGG 002160
002161 TCATGGCACA GCCATCAGCT GCAGCTCCCA GCATGCTACT GCCACGCCCC GAGTGTCCGT CTGGGCACTG GTCCATGACC 002240
002241 TGTTGTCTTT CTGTATCTAC TTTCTGCAGC CCCTCACTGA GGAGGCCTCC TGGGTTTGTC CAGTGCCTGC TATTAAAGCT 002320
002321 TTGCTCCAAG TTC
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Predicted Small Protein

Name ENST00000445433.1_smProtein_419:700
Length 94
Molecular weight 10577.9047
Aromaticity 0.0967741935484
Instability index 46.952688172
Isoelectric point 9.48724365234
Runs 14
Runs residual 0.0196136997212
Runs probability 0.0347868877282
Amino acid sequence MTPIVGDGCIRVSLLASVFTHAWASYPHHPLTPEGLGWVPEIPRRVREDHGDSHHPHPGS
LPKRLQEGCWRVSWRPPRAFSHGAHVSPRSWWL
Secondary structure LLLEELLLLEEEEEHHHHHHHHHHLLLLLLLLLLLLLLLLLLLHHHHLLLLLLLLLLLLL
LHHHHHLLLEEEEELLLLLLLLLLLLLLLLEEL
PRMN -
PiMo -