ENST00000446548.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000446548.1 |
Source |
Gencode19 |
Same with |
lnc-KCNMB2-5:5,NONHSAT093353 |
Classification |
intergenic |
Length |
519 nt |
Genomic location |
chr3+:177394498..177469920 |
Exon number |
2 |
Exons |
177394498..177394794,177469699..177469920 |
Genome context |
|
Sequence |
000001 ATTAAATGTA AAATGGCAGA AACATTCGTT TTGGGCAAAT TTCTCATTTT AAATGAGTTC TATTTAGAAA CAAAACAAAT 000080
000081 GAAATGGTGG CAATATCAAT TACAAGGATG ATAAGGCTTT ATCTGATCAC ATCTTCAAGG TTTTATGCCT TTTCCTTCGT 000160 000161 GTCCTGTCCT TCCCTCCTCC ACTCCCCACT CCTGTTTCTC TGTATGTCAG GTTTCAACAA GGGGAAAAAC AAAAACTTTG 000240 000241 CAAGGATATT TCGAGGGTGA GAAAATGTTA CGATGGACCT GCATTTCTTT ATTAATGAAA CACCACCTGG AACACAGCTG 000320 000321 TGACTTGATA AACAAGTGAA ACATTCTTTG GTGTGGTGAG GGGAAAACAA ATTTCTCAAA GGACACGCAC CATGGTGTAT 000400 000401 GAGAGGACAC TGGAGCCCAG CCAGCATCTG ACATGCTGAA TTCAAAGTGC AGGTGAAAGT AGGACAACTG ATTCACAAGC 000480 000481 TGGGATGCCT GTGTTGTTGT TTGCCAGTGT GCGTGTGTG |
Predicted Small Protein
Name | ENST00000446548.1_smProtein_83:259 |
Length | 59 |
Molecular weight | 6652.942 |
Aromaticity | 0.155172413793 |
Instability index | 60.3898275862 |
Isoelectric point | 11.0101928711 |
Runs | 10 |
Runs residual | 0.01582038651 |
Runs probability | 0.0537007595831 |
Amino acid sequence | MVAISITRMIRLYLITSSRFYAFSFVSCPSLLHSPLLFLCMSGFNKGKNKNFARIFRG |
Secondary structure | LEEEHHHHHHHHHHHHLLLEEEEEEELLLLLLLLHHHHHHHLLLLLLLLLLLLLEELL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiii |