ENST00000446989.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000446989.1

Source

Gencode19

Same with

lnc-RASA3-1:1,NONHSAT035429

Classification

intergenic

Length

514 nt

Genomic location

chr13-:115095034..115099423

Exon number

3

Exons

115095034..115095320,115096141..115096253,115099310..115099423

Genome context

Sequence
000001 CTTCACCCCT GGCTCTCGGC AATGCTGCTC CTCTCTCCTG CATGGATCAC CTGCTCCTGG AATTCATTCT CCCATTTCTT 000080
000081 AGGTTGCCAC TTTACTGTAG CTTCCTAATC GAAGAGTCTT GCTGTGTCAC CCAGGCTGGA ATGCCGTGGC ACAATCTCGG 000160
000161 CTCAACCTCC ACCTCCTGGG TTCAAGTGAT TCTTCTGTCT CAGCCTCCTG AGTAGCTGGG ACTACAGGAA GAGTGCACAG 000240
000241 GAGCCTGGCA CTCCTGGACC TGAGGAAACC CTGAAACTGT TGGTATTTGC AGATCCTCTC CAAAAAGAGT TCACCGATCT 000320
000321 CCTAAGACTG CAAACCTGAC CCCAGCATGC TGGGAGCCAA GAGGGTCTGC GGATCTCCCT GCTTAGCAAA TTGTGTGTAT 000400
000401 ATATATACAC ACACACACAA TGAAATACTA TTCAGCCTGA AAAGAAGAAA ATCCTGCCAC TTATGGCAAC AGGGATGAAT 000480
000481 TTGAAGGACA TTATGTTAAG TAAAATAAAC CAGA
[back to top]

Predicted Small Protein

Name ENST00000446989.1_smProtein_41:214
Length 58
Molecular weight 6505.5797
Aromaticity 0.105263157895
Instability index 74.3754385965
Isoelectric point 4.71429443359
Runs 10
Runs residual 0.0214912280702
Runs probability 0.0248542660307
Amino acid sequence MDHLLLEFILPFLRLPLYCSFLIEESCCVTQAGMPWHNLGSTSTSWVQVILLSQPPE
Secondary structure LLLHHHHHHHHHHLLLLEEEEEEEELEEELLLLLLLLLLLLLLLHHHEEEEEELLLL
PRMN -
PiMo -