ENST00000447809.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000447809.2

Source

Gencode19

Same with

lnc-CSRNP3-4:2,NONHSAT075279

Classification

antisense

Length

2305 nt

Genomic location

chr2+:166938041..167158294

Exon number

12

Exons

166938041..166938188,166949063..166949173,167027897..167028068,167056149..167056328,167104705..167104786,167105853..167105894,167108289..167108422,167133598..167133757,167151075..167151237,167152533..167152639,167155200..167155351,167157441..167158294

Genome context

Sequence
000001 GTCTTAGTCC TCTGAATATT TTTTCTTTGT TCAGAACCTG AGAAAGATGA ATGAAATTTA GTGTTTCCCA TCCCCGAGAG 000080
000081 ACACCCAGCA TCCACAACTT CACACTCTGA TGCCATTGTG TATTTATGCA AGAAATACCA TAACTAAGAT GAGGTCTCGC 000160
000161 TATGTTGCCT AGGCTAGTCT TGAACTCCTG GCCTCAAGTG ATCCTTCTGC CTCAGCATCG GGAGTCACTG GGATTAAAGG 000240
000241 CATGAGCCAC CATGCTCAGG AACTTGACAT CATCAGACAG TAAATCAAGA GGTACTGACA ACTGAGACTG AGTGATGGTC 000320
000321 CCTGCCTAGG ATTTGGAATC TTTGCATGAA ATAGGGACTC TAGCCACCAG CGACAAAGAA GTCAGGGAGA CTGCGGTCTC 000400
000401 TAGGAAGCAC TTCCAGGAAA CAGGAATTCA GGCAAAGTTG GACATTCCAA AGATGGCGTA GATGAACATG ACCAGGAAGA 000480
000481 GCAGGAGGCC GATGTTAAAC AACGCAGGAA GGGACATCAT CAAAGCAAAG AGCAGCGTGC GGATCCCCTT TGCTCCTTTG 000560
000561 ACTAGACGTA GGATTCGGCC AATCCTGGCA AGACGGATCA CTCGGAACAG GGTAGCAGAG ATCTCTGGAG GTGAAACATT 000640
000641 GCTCTGAACT GGCATTGATT CTAGCCCAGC TCTTGTAGAC CAATTACCAA CTTCTCCATC TCCCTCCAGT GCCTGGAACT 000720
000721 GGACCTGGCA CACAGGCCTC TGGCTCATCG GAATTCATAG GTTCAGCCTC TGCTTCTTCT CCTTCTCCAG GCAAAGGGTT 000800
000801 ATCAACTGTG CTGCACTCTG AGGAGCTTGA CCGGTTTAAT CTCTAGAAAG GAATTCACCA CCCCACCAGC ACGCGGAACA 000880
000881 CAATCAGGAA GGAGTGGAAG AAGTCGTTCA TGTGCCACCG TGGGAGCGTA CAGTCATCAT TGATCTTGCA GACACATTCT 000960
000961 TTGTAGCTCT TACCAAAGAG CTGCATGCCG ACCACAGCAA AAATGAAGAC GATGATGGCC AACACTAAGC CTTTAGACTA 001040
001041 AAAAGAAAAC AAATATTACA TACCCTGAAT CTGTGCTGAA ACCACAAAGG AGAGCATCTT TGGATCCTTC CAAGTAATAA 001120
001121 AAATATTCTG TTGAAGAAGA ATTTGAACAG TTATAACATC ACAGACTTTA ATCTGTGATT GTGATAAAGG AGGTCAAATT 001200
001201 AAAAAATCTG ATTATTGGGA GACTTTTGGA GTAATCATGG AAGAAAGACT ATGAAATCAG ATATTCTTGG ATTTGAATGT 001280
001281 TGCTTCTATC CCTTCTTAAC TTAAATCCAT GGGCATTCAT TATCATCAGT GCCTAACCTG GCAGAACCAC AGTCTACACA 001360
001361 TAATCTGGCA TCTGTCTTTT CCATGCTGGC TACCAAATGG CTGAATGTTG GTGGAGAAAC TCTCACAACC AAGTGAATGG 001440
001441 TTATATTTTA ATTTCGCTCT TGTTGCCCAG GCTGGAGTGC AATGGCACGA TCTCGGCTCA CCGCAACCTC TGCCTCCCGA 001520
001521 GTTCAAGCGA TTCTCCTGCC TCAGCCTCCT GAGTAGCTGG AATTACAGGC GCCCACCACC ATGCCCGGCT AATTTTTTGT 001600
001601 ATTTTTAGTA GAGACGGGGT TTCTTTTTTT TTCTTCTTTT TTTGTATTAT TTTTTAGCAA AAAAAAAAAA AAATACATGA 001680
001681 AGCAATTCCA GAAAGCGATG AATTAAATTA AATTTGATTA AAGGCTGTCT GTGTACATAG AGAATTGCAA TCTAACTTCA 001760
001761 TATGTAAACA AATTGCATTC TAATCTATTA GTATATTCTT GTAACAAGTA GCTGTCTCAG CCAATCACAG CAGCTGAGCT 001840
001841 TCAGCCAACC ACAGCCTGCT GATTTATCAG ACAATGTCCA CATAAGGCAA ATGTCAAGCT ATAAGCAATC AAGCTGTTTT 001920
001921 TGTGCGTCAC TCCCTTTTTC TGTCTATAAA TACTCCTGCT CATGTTGCTG AGTTGAGCTC TCCGAACTTC TCTTGGTTCT 002000
002001 GAGTGCTGCC TAAATCATTA TTATTATTAT CTTATTTCAG CAATAAATAC TATTTCATTG CTGAAATAAG CTGCTAAATT 002080
002081 TAATTTGTTG AAAATTTTTC TTTTAACAAA GGTTAAGAAA ACCATTCACA GTATAAACTC AGAAATAGGA GCAAGACTCA 002160
002161 GAATAAAAGG ACAGATCCCA GTGAGAAAAC TTAAGTTTAA ATAAGTGTGG TAAAATAATC TACAATATTA AATGTAAGTT 002240
002241 ACTCATCAGA TATATTAATT TTACAGCATA TAAATTAAGA AATAAAATTC TCCATCCATT GGAAA
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Predicted Small Protein

Name ENST00000447809.2_smProtein_461:646
Length 62
Molecular weight 7027.3161
Aromaticity 0.016393442623
Instability index 71.893442623
Isoelectric point 12.354309082
Runs 11
Runs residual 0.0275108347466
Runs probability 0.0300139711904
Amino acid sequence MNMTRKSRRPMLNNAGRDIIKAKSSVRIPFAPLTRRRIRPILARRITRNRVAEISGGETL
L
Secondary structure LLLLLLLLLLHHHHLLHHHHHHLLLLLLLLLLLLLLLLLHHHHHHHHHLLEEEELLLEEL
L
PRMN -
PiMo -