ENST00000447899.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000447899.1 |
Source |
Gencode19 |
Same with |
lnc-C1orf111-1:1,NONHSAT007214 |
Classification |
intronic(AS) |
Length |
517 nt |
Genomic location |
chr1-:162286642..162287584 |
Exon number |
2 |
Exons |
162286642..162287110,162287537..162287584 |
Genome context |
|
Sequence |
000001 CCTTTCTCAT AGGAAGGAAC CAGAAACGTG ACATGGATCA AAAGGACATG TTTGAGTCTG AGGACACACC ACTGGCCCAG 000080
000081 ACCCTGGACG GCTGCTCCGA CTCTGGAAGG AAATGCACCT GCACTACCTC ATCTCCCCCA GCAATCAGGT CCATCTCCAA 000160 000161 CAATTAATTA TGTGCTGATG GGAGACACTG AGCAACGATG AGCTCATGTG TAGATCTCAT CTGTCAGGGG CTGCCATTCT 000240 000241 GAGGTTCTTC TTGCTCACCT CCTCCAAAAA ACCTTTTATT GGAGCAATTA ATACAAACAA GATGAACACA TTTACCCTTT 000320 000321 ATGATGGCTT CATTTCTCCC ACCCACCCCC TTATCATTAT GAATTATCAG TAAAAACTGC AACAAATGAG ACAAGAGATG 000400 000401 AGGTCAATGT CAGGCCTCTG AGCCCAAGCT AAGCCATCAT ATCCCCAGTG ACCTGCACAT ATACATCCAG ATGGCCTGAA 000480 000481 GCAACTGAAG ATCCACAAAA GAAGTGAAAA TAACCTT |
Predicted Small Protein
Name | ENST00000447899.1_smProtein_32:166 |
Length | 45 |
Molecular weight | 4739.1494 |
Aromaticity | 0.0227272727273 |
Instability index | 71.7886363636 |
Isoelectric point | 4.32952880859 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.0461049284579 |
Amino acid sequence | MDQKDMFESEDTPLAQTLDGCSDSGRKCTCTTSSPPAIRSISNN |
Secondary structure | LLLLLLLLLLLLLHHHLLLLLLLLLLEEEEELLLLLLEEEELLL |
PRMN | - |
PiMo | - |