ENST00000448729.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000448729.2

Source

Gencode19

Same with

,

Classification

intergenic

Length

1899 nt

Genomic location

chr10-:81807463..81838600

Exon number

4

Exons

81807463..81808934,81813152..81813342,81820572..81820689,81838483..81838600

Genome context

Sequence
000001 GGGTGAACCG AGCGCTCGCT CGTTCGTCAG ACCGTAGCGC TCCAGCGGCT GTCCTTACTG TGTAGTAGCC AAAGCTGAGG 000080
000081 GTGATGACTG TGAACCAGAA CAGACTGCCT CGCTGAAAAG TCACTTGGAA CTCTTCTGTG GCATCTGAAG CAGATGGACG 000160
000161 AAGCCAAGAG GGCCGAGAGT ATCTCAGCAC CTAGAAATGG ACAAGGCTGG TTATTAGAAC AAAGATTTCG CAGGTGGATC 000240
000241 TCCCATTAAC CAGTCATAAT GAAGTAAGAA CAAGAAGATG GGGAAGAGGA AGTGTAAAAC CGTGGCTTAA ATTTGCCAAG 000320
000321 GATAAGCTGA GTGTACTTCA GCAGTCATTT GCACAGAATC CTTATCCTAA TTTTACAACC AGGGAAAAAC TGGCTGGACA 000400
000401 GTCTCTTGTC CTGTGTTTGT AATTGATAAC TGGTTTCAAA ATAAAAGCCA GACCACCACT TAGAGAGAGA CACAGAATGT 000480
000481 TCACTGCCAG GGAACTGCAT GATTCCTCTG CCAAAGGCCA CCCATTTACA AGAATCCAGG AAAACCAGGT GGAATCTCCC 000560
000561 AATGATGACC CTGAGCAGAA CTTCTTGTAC CCAGGAAGTT CTACTGGGTG GAGCTGGCCA CTCTTCCGTG GAGACACAGG 000640
000641 GGACTCCCAA TTAACATGAT GGCTCAAATA ACTGTAGCCT TATGGATTAA AAGGAAACTA AGCTGTGATT TGGAGTATCC 000720
000721 AGGTGATACA GAAAATGGCC CTTGTCGATG TAGATCAGCA TTATTTCCTT ATCCTTCTGC ATCTCCTCCT CAGTATTCTG 000800
000801 AAAGGGACAA GCCTGAGATG GGGGAAAGCC AGCATGCAAG GCCCTCCCCT TTGTGCTGTG TTCATGGTGT GCACGGAGAG 000880
000881 AGGCAGCAGC AGGAGGAACA GAAAGGTTAT TTTCTTTACT GACTCTTTCA AGGACATCAG CAGAATGGTT GGGAATGTCA 000960
000961 TCATGAGCAG CCTCAGCCTC AGAATTACCA GGAGAAGCTG GTCTTCCAGG ATCAGGTTCT AATGTATATG AGTCACAGGA 001040
001041 TTTAGGGAAG CAGGCACTTT CCCTTCAGTC CCAGCAGCAT GGTTGATGTT CCCAAGTAAT GGAGAGTCCC TGTGCTCTCA 001120
001121 GTTGTGGCAC ACACCTTTGC AAATAGTGAT CAGATCTCCA CAAACGCCTC TTGGGTAAGA TATGCAGCAA CATAGCTGGC 001200
001201 TGCAGAGCAA CCCAGTTCCC AAATCCAGCA GCTCTTGGAT GAGAAGTCTG CAAGTGTTTA CTGCTGGGAC CAGGACTGTG 001280
001281 TTTCTAGGAA ATGGTGCTAG GCTTCAGAGA GCATCATCCA CAGGTCATCC CACAACCATC CACACAGAAG CCTGAGGAAA 001360
001361 AGGGCTCTGC AGAGCTTGCA CATAAAGATG CTGAACTCAG GAAGGCTCTG TGAGCTGCTG GTCTCTTCTG GTAGGGCAGC 001440
001441 AGTGTCCTGA GAAGGTGGAG CTAGAGTATG GAGAACAAAA CTAACAAGCA CCAAGGCAGC AAGCAAGGCA ACCCCCAAAT 001520
001521 GACAGCAGTT GCCAAATCCA AAGCAATCTG TGCTTCAGAA GACAGAGGCT CTGCACAGTC CCTGTCTCAG ACATTGTCTC 001600
001601 CTCCTTAGAA GATACCTAAC AACAGCACTG TGGGAGGCTG AGGTGGGTGG ATCACCAGGT CAGGAGATCA AGACCATCCT 001680
001681 TGATCTTTAG TAGAGACGGT GAAACACTGT CTCTACTAAA AAATACAAAA AAAAATTAGC TAGCCGTGGC GGCGGGCACC 001760
001761 TGTAGTCTCA ACTATTTGGG AGGCTGAGGC AGGAGAATGG CCTGAACCCG GGAGGCAGAG CTTGCAGTGA GCTGAGATTG 001840
001841 CGCCACTGCA CTCCAGCCTG GGCAACAGAG TGAGACTCCA TCTCAAAAAA AAAAAAAAA
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Predicted Small Protein

Name ENST00000448729.2_smProtein_734:1021
Length 96
Molecular weight 10950.9071
Aromaticity 0.0947368421053
Instability index 60.4631578947
Isoelectric point 11.3980102539
Runs 17
Runs residual 0.0498963945296
Runs probability 0.0310587404013
Amino acid sequence MALVDVDQHYFLILLHLLLSILKGTSLRWGKASMQGPPLCAVFMVCTERGSSRRNRKVIF
FTDSFKDISRMVGNVIMSSLSLRITRRSWSSRIRF
Secondary structure LLEEELLHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLEEEEEEEEELLLLLLLLLEEEE
EELLHHHHHHHHHHHHHHHLEEEEEELLEELLEEL
PRMN -
PiMo -