ENST00000449017.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000449017.1 |
Source |
Gencode19 |
Same with |
lnc-CRYBA4-1:33,NONHSAT084539 |
Classification |
intergenic |
Length |
583 nt |
Genomic location |
chr22+:27068754..27113422 |
Exon number |
3 |
Exons |
27068754..27068950,27107793..27107971,27113216..27113422 |
Genome context |
|
Sequence |
000001 TTTCCTACGC TAAAAACCAC TGAGTGGAGT ATTTAGTACA CAGGAAGTCG GCCAGAGAAA CATTTCTCAT ATTTGAAGGC 000080
000081 CGGAAAGAGG GACATTTCTG ACACCGGAAG TCAGTGAGAG GACTCTTTCC CACACAGGAA GTCAGCTAGA GAGCCGTCTC 000160 000161 CCCTCTCTGG AGCCGAGAGA GGCCGGTTTC CCCCACCACT CTCAGGGTAA AGAAGGAAAT GAGAAATTGC AAGACAGAGT 000240 000241 ATTTCTTAGG CAATGGCTGA GAATGGCAAC TCACCACATG CCTTTGAATA AGACGTGATT ATTATTAACC CATATTCTAT 000320 000321 CAAAGAAGAA ACTGAGGCTC AGAGAGGCAA CTTACTTGCC AAAGGTCACT CTGCTGGTAG CCCACCTGGG AGGAATTTTC 000400 000401 CAGAGATCAC TGTCTGATGA CCCTGTCTTG GAATTGGAGC CATGCAAGTT ACACTGACCA CGTTTGGGTT GGGATATTGA 000480 000481 GGAGGTTATG GTTAAAAGCA TACGATGGGA GATCATATTG TACTTGCGAG TGAGACCCGG CTGGAGGAAT GTTTTAATTC 000560 000561 TTCGGAAATA CCAAGTGGTC TCT |
Predicted Small Protein
Name | ENST00000449017.1_smProtein_416:532 |
Length | 39 |
Molecular weight | 4606.185 |
Aromaticity | 0.184210526316 |
Instability index | 59.3894736842 |
Isoelectric point | 7.83697509766 |
Runs | 5 |
Runs residual | 0.0410318559557 |
Runs probability | 0.0424306659601 |
Amino acid sequence | MTLSWNWSHASYTDHVWVGILRRLWLKAYDGRSYCTCE |
Secondary structure | LEEEELLLLLLLLLLHHHHHHHHHHHHHLLLLLLLLLL |
PRMN | - |
PiMo | - |