ENST00000449984.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000449984.1 |
Source |
Gencode19 |
Same with |
lnc-CTBP2-1:1,NONHSAT016868 |
Classification |
intronic(AS) |
Length |
830 nt |
Genomic location |
chr10-:126633773..126635001 |
Exon number |
2 |
Exons |
126633773..126634478,126634878..126635001 |
Genome context |
|
Sequence |
000001 TTTTTTTTTT TTTTGAGACA GGGTTTTGCT CTTGTTGCCC AGGCTGCAGT GCAATGGTGC AGTCTTGGCT CACTGCAACC 000080
000081 TCCACCTCCC AGGTTCAAGC GATTCTCCTG CCTCAGCCTC CCAGGAGGCT GAGGTGGGCG GATGGCTTGA GCTTAGGAAG 000160 000161 TCAAGGCTGC AGTGAGCCAT GATTGCAGCA CTGCACTCCA GCCTCGCGAC CCTGTCTCAA AAAAATAAAT AAAATGCAAA 000240 000241 GAGGTACAAG GATGGCTAGT CGTCTAGTCA AAAGTAGTAA GGATATGTAG AAAAAGGCAG GACCAAGAAG AAATAATGTC 000320 000321 ATAAAGACAA ACATGTTGAT TCATCTAACT TGTGTGTTTC AAGGAAAGAA AATATTTCAA ATCAGGTGTT CTTATCCTGA 000400 000401 GATCCACTGA CTTGAAGCAA CCGGGGGTTG AAATGAAGCC CTGATTCCTA AAGGATTCTA TGACCTTTAG TGAGGTTTAG 000480 000481 TGACCTTCAC TGTGAGGTTA AGAACCGTCA CAATGAAGTC TAGTTCATTT TCATCTATAA ACCTACATGT ACTATAACAC 000560 000561 CACCTTGTAG TCCAAGTATT CATAGTACAC TACTCCCTGA AAAAAAAAAA AAAAAAAAAA AAAATGATTT TAAGACTGTT 000640 000641 CCAAAGGCAT ACAAGCAATT AAAAGACAAT CACACCCAAC ATAAAAGCTC ACAGATATGT AAAGATTCCA TTTATATGAA 000720 000721 TATCCAGAAT AGGTAAATCC ACAGACACCA AAAGCAGACT GGCAGTTATC AAGGGTTAGC GGGTAGGGGT AGGGGGCAGT 000800 000801 AACTGCTTAA TGGGTACATA GTTTCCTTTT |
Predicted Small Protein
Name | ENST00000449984.1_smProtein_53:181 |
Length | 43 |
Molecular weight | 4567.1676 |
Aromaticity | 0.047619047619 |
Instability index | 87.1047619048 |
Isoelectric point | 8.00030517578 |
Runs | 8 |
Runs residual | 0.0143158529234 |
Runs probability | 0.0179076134958 |
Amino acid sequence | MVQSWLTATSTSQVQAILLPQPPRRLRWADGLSLGSQGCSEP |
Secondary structure | LLLLEEEELLLLHHHEEELLLLLLLLEELLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |