ENST00000451579.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000451579.1

Source

Gencode19

Same with

lnc-GABRA5-2:3,NONHSAT041181

Classification

intergenic

Length

606 nt

Genomic location

chr15+:26640219..26691921

Exon number

3

Exons

26640219..26640391,26690704..26690790,26691576..26691921

Genome context

Sequence
000001 GTGCCTGAGT AAGCCCCATG GGAACACAGC CGTGGTGGGA AGCAGCTTCC CAGCAGCCCT CCCCGCCATC GGGAGAATCC 000080
000081 CCTGAGGCCA TGAGAGGGTC TCAGGGAGGT GGACGGCCCA TCAAGTGAGA ACCGAGGGCA CTGTGCACTC CTGAATCCTA 000160
000161 GGACTCCTCT TAGCTGTGTC TTGTCTCTAC TTGGGGTACA ATTAATAGCA GAGCCAGTCA TGTCCTACCA GCATTCCTTT 000240
000241 TATACAGGCT GGATATATGT GTCATTGACT AACAACATCA ACAATGAAAT GAATCTGAGA AAACAGGAAA TTGAGAGCAA 000320
000321 GAGAAAAAAA AGTTAATTAT ACTGATTTTG TATAAGACCC CTTTGAACAC ATTTTTAAAA AATCAAATAG AAGGTGCCCA 000400
000401 GGTCCACTGT GCCTTGTGAA TATTTGTCTT GTATATCCTA GAGATCTACG CATTCATGTG GGAATTGAAA AGGACCCACA 000480
000481 TTTTACTAGA AGCATCGTTC ATTTTTGCCT CAAAACAATG CCCACATGTC AGAAGAACTT TCACAATTCA CAGGAACAGT 000560
000561 GACCTAATTA ACCAACCATA AAATTGCCAA ATCCCTACTT CTCATT
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Predicted Small Protein

Name ENST00000451579.1_smProtein_455:580
Length 42
Molecular weight 4935.6914
Aromaticity 0.0975609756098
Instability index 65.5341463415
Isoelectric point 10.0368041992
Runs 7
Runs residual 0.00523716893611
Runs probability 0.0360234183763
Amino acid sequence MWELKRTHILLEASFIFASKQCPHVRRTFTIHRNSDLINQP
Secondary structure LLHHHHLHHHHHHHHHHHHLLLLLLLLEEEEEELLLLLLLL
PRMN -
PiMo -