ENST00000451579.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000451579.1 |
Source |
Gencode19 |
Same with |
lnc-GABRA5-2:3,NONHSAT041181 |
Classification |
intergenic |
Length |
606 nt |
Genomic location |
chr15+:26640219..26691921 |
Exon number |
3 |
Exons |
26640219..26640391,26690704..26690790,26691576..26691921 |
Genome context |
|
Sequence |
000001 GTGCCTGAGT AAGCCCCATG GGAACACAGC CGTGGTGGGA AGCAGCTTCC CAGCAGCCCT CCCCGCCATC GGGAGAATCC 000080
000081 CCTGAGGCCA TGAGAGGGTC TCAGGGAGGT GGACGGCCCA TCAAGTGAGA ACCGAGGGCA CTGTGCACTC CTGAATCCTA 000160 000161 GGACTCCTCT TAGCTGTGTC TTGTCTCTAC TTGGGGTACA ATTAATAGCA GAGCCAGTCA TGTCCTACCA GCATTCCTTT 000240 000241 TATACAGGCT GGATATATGT GTCATTGACT AACAACATCA ACAATGAAAT GAATCTGAGA AAACAGGAAA TTGAGAGCAA 000320 000321 GAGAAAAAAA AGTTAATTAT ACTGATTTTG TATAAGACCC CTTTGAACAC ATTTTTAAAA AATCAAATAG AAGGTGCCCA 000400 000401 GGTCCACTGT GCCTTGTGAA TATTTGTCTT GTATATCCTA GAGATCTACG CATTCATGTG GGAATTGAAA AGGACCCACA 000480 000481 TTTTACTAGA AGCATCGTTC ATTTTTGCCT CAAAACAATG CCCACATGTC AGAAGAACTT TCACAATTCA CAGGAACAGT 000560 000561 GACCTAATTA ACCAACCATA AAATTGCCAA ATCCCTACTT CTCATT |
Predicted Small Protein
Name | ENST00000451579.1_smProtein_455:580 |
Length | 42 |
Molecular weight | 4935.6914 |
Aromaticity | 0.0975609756098 |
Instability index | 65.5341463415 |
Isoelectric point | 10.0368041992 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0360234183763 |
Amino acid sequence | MWELKRTHILLEASFIFASKQCPHVRRTFTIHRNSDLINQP |
Secondary structure | LLHHHHLHHHHHHHHHHHHLLLLLLLLEEEEEELLLLLLLL |
PRMN | - |
PiMo | - |