ENST00000451772.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000451772.1

Source

Gencode19

Same with

lnc-XRN2-2:11,NONHSAT078927

Classification

sense

Length

536 nt

Genomic location

chr20+:21199097..21224992

Exon number

4

Exons

21199097..21199230,21206747..21206933,21209649..21209753,21224883..21224992

Genome context

Sequence
000001 AGAAAATACA TCAATTAATA CATATTTTGT TGCCCAGCCC TGTGTGATCC TTCTCTCTCT CTGCAGTATG CATAATGCAT 000080
000081 AGAAGCATAG TGAAGACTTG GAAAAGACTT TCAGCAAAGG AATTGTTTAA AAATTGTTTT ATTTTTAAAA AGAAGAAAGA 000160
000161 AAAGGCAGAA GTCTGGCAAG ACCAGGACCA CTTTCCCACC AGGCAGCAAT TGGCTGAAGC CAAGGAGCAG CTGTGCTCTA 000240
000241 TAGACAAGTC ATGTGCCTCC TTGCCTGCTA CAGGGCAGGC CCTTCCTGCT GCTCCTGCCT GGCCATAGTC ACTTATTGGA 000320
000321 GAAACAGAAG CCTATCAGTT GCTGAAGAAG GCCACCCTTC AGGATAATAC AAATCAAACT GAAAACAGGT TTCAAAAGAC 000400
000401 AGATGCTTCT GTGTCACACT TGTCAGGCAT GAAAACAAAA AGAAACCCGT GATCAATTTA AAATCTAATG GTGAGAGAGA 000480
000481 TAATCGGACA CTAGATTTTC TTTTTCTGTT TTAACCAAAA AACTCTGTGA CATGCA
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Predicted Small Protein

Name ENST00000451772.1_smProtein_74:307
Length 78
Molecular weight 8841.1908
Aromaticity 0.0909090909091
Instability index 50.2402597403
Isoelectric point 9.51214599609
Runs 13
Runs residual 0.0327498588368
Runs probability 0.0344530050412
Amino acid sequence MHRSIVKTWKRLSAKELFKNCFIFKKKKEKAEVWQDQDHFPTRQQLAEAKEQLCSIDKSC
ASLPATGQALPAAPAWP
Secondary structure LLHHHHHHHHHHLHHHHHHHHLEELLLHHHHHHHHHLLLLLHHHHHHHHHHHHHHLLHHH
LLLLLLLLLLLLLLLLL
PRMN -
PiMo -