ENST00000452402.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000452402.1 |
Source |
Gencode19 |
Same with |
lnc-BCKDHB-1:4,NONHSAT113728 |
Classification |
intergenic |
Length |
682 nt |
Genomic location |
chr6+:81153061..81175644 |
Exon number |
4 |
Exons |
81153061..81153255,81162874..81162978,81172589..81172789,81175464..81175644 |
Genome context |
|
Sequence |
000001 ATAATTTTGT GTCTTGATAA AGTAGGAATA TGGCTGGGAC CATCCCTGAC TCTCTTTTTT CCTTGAATGT GAACACATGA 000080
000081 GTGAAGCATA CATCCATTGT CCATGGGGCA AGAAACATGA GGATGAAAAG CCAATATGTT AAGGACATGA AGTGAAAAGC 000160 000161 GGGAAGAGCT TCTTATTCAT GTTATCACTG AGCAGCGGGA ACTGGGGGCT CTGCTCATTA TAGTTGCCCA CGGCCTCCAG 000240 000241 TCAATGAAAT TTCCGGCCAA TGAAATGCTC TACTGTGACT GAAGCAGCAA AGAGAAGATG TTCTGCCGGA GGCCTCTCCA 000320 000321 GATTGTGATG CACTGGGAGC AAGCCACCAT GAACATATCC TCAGGTCTCC AGTCTTCTGC CATCGCATGA AAAATGGAGC 000400 000401 TTGTCAAACA CAGAGCAGAG CTGAACTTTC TGAATTCCAC AGGACAGTTC AGAGTGCTTG GAATGACACC CACCTGCAAT 000480 000481 TTAAACAAAA AAGAAGGATG ATTTGCTGCT ACATTTGTGT GGGAAGTGCT GCTTGCCGAT AGGGAAGTAG GAGAGGAAAT 000560 000561 AAGGAAAACA ATAAACCAAG TACAGTTTTG CAAATACCCA GACACATTGG ATGGACACAG AAGCTTTCAC TGGGAGATTA 000640 000641 TGAAGGGTAG ATGCTTTGTG TCTCCATTGC CTCCTGTGAT GT |
Predicted Small Protein
Name | ENST00000452402.1_smProtein_386:541 |
Length | 52 |
Molecular weight | 5893.7485 |
Aromaticity | 0.078431372549 |
Instability index | 64.8058823529 |
Isoelectric point | 9.29998779297 |
Runs | 9 |
Runs residual | 0.0222286934576 |
Runs probability | 0.0462226932815 |
Amino acid sequence | MKNGACQTQSRAELSEFHRTVQSAWNDTHLQFKQKRRMICCYICVGSAACR |
Secondary structure | LLLLLLLLLLHHHHHHHHHHHHHHHHLHHHHHHHLLEEEEEEEEELLEEEL |
PRMN | - |
PiMo | - |