ENST00000452716.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000452716.1 |
Source |
Gencode19 |
Same with |
lnc-ETAA1-5:2,NONHSAT071261 |
Classification |
intergenic |
Length |
1074 nt |
Genomic location |
chr2+:67313578..67523207 |
Exon number |
6 |
Exons |
67313578..67313687,67492129..67492324,67495616..67495770,67514888..67514950,67516215..67516556,67523000..67523207 |
Genome context |
|
Sequence |
000001 GGCCATGTGA GGTCTCAGCA AGAAGGCCAT AGTCTACAAA CCAGAAAGGC AGCCCTTACC AGAGACCAAC CCTGCCAGAC 000080
000081 CTTGATCATG GACTCCTAGC CTCCAGAACT AGACAGGGTC TCACTATGTT GCCCAGGCTG GTCTCAAATT CCTTCTCAAG 000160 000161 TGATCCTCCC ACCTCAACCT CCCAAAGTGC TGGGATTGCA GGCATGAGCC ACTGCACCCA GCAGAAATTC TTAACGAGGC 000240 000241 AAGGCCAACA GAGGCCATTC ATTCAACATC ACGGCACCAT AGTGGCCTCT TTTTAAGACT CCTCAGGTTC CAGATAGATT 000320 000321 TCATCACTCA AGATAAGCAA ATGAACCACA GAATTTTGAA GTTAGAGGTA ATTACAGCAA TGATCTTAGC CAGCCCCCAT 000400 000401 ACATTTTGGG ACACACAGGT TCAGGACTGC CTGCCCTGGA GCTGATTCCA TAAGATACCC AAACAACTTC TGAAAGAGAA 000480 000481 AAAAGTCTTT GTCTCAGTTT CTGCTCTCCA GAGGTAACCC AAAGAGGTAA GGAACCCAGT GAGAAAGACA GAGAGAAGTA 000560 000561 TGGACAAGAA ACAGATCCTA AACCTGTTTT GTTTTATTTT TGGTAGTAGT TGTTTATTTT TGAAAACATT CAAACCACCT 000640 000641 GTATTGGTGG CTGTTATTAT GAAATAAATA AACTGAGAAA CAACAAGACA ATTTGGCCTC TACAATTTGT TTAGTTTTGA 000720 000721 CTAAGTATTT GCCTTGGAAG AAGTATGTGT ACAATACTCA TTTTTAAAAG ATGCAACAGT CACCTCGTTA CTTGGAGTTT 000800 000801 TACTTGAGAC TTGAATGGAC TGAAACCACC TGGTCACCAC TAGAAGCTAC ATCAAGGAAA AGAAAGGCAA CATATTGAAT 000880 000881 CTCTTGGGAG AAACTCATCC TGTATCTGCT CGATTGAAAA CATGAAGGTG CACATTCCAA GCTGCATATG CTCAGGTCCG 000960 000961 AGTTTCCAAG GAAACAAGGG ACTGCTCATC TATCTGCAAA ACTGAACTGA CGAGTCACTT TCAGCTTGTT ACAAACCTTG 001040 001041 ATTCTGAATC AAATTCTAGT GTGCAGTCTA AAAA |
Predicted Small Protein
Name | ENST00000452716.1_smProtein_125:295 |
Length | 57 |
Molecular weight | 6102.8096 |
Aromaticity | 0.0714285714286 |
Instability index | 53.1964285714 |
Isoelectric point | 10.7631225586 |
Runs | 11 |
Runs residual | 0.0431303669009 |
Runs probability | 0.0326476208829 |
Amino acid sequence | MLPRLVSNSFSSDPPTSTSQSAGIAGMSHCTQQKFLTRQGQQRPFIQHHGTIVASF |
Secondary structure | LLLLEELLLLLLLLLLLLLLLHHHLLLLLLHHHHHHHHLLLLLLEEEELLEEEEEL |
PRMN | - |
PiMo | - |