ENST00000453671.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000453671.1 |
Source |
Gencode19 |
Same with |
lnc-FAM43A-4:1 |
Classification |
antisense |
Length |
1119 nt |
Genomic location |
chr3+:194304740..194310989 |
Exon number |
4 |
Exons |
194304740..194305177,194309750..194309871,194310203..194310355,194310584..194310989 |
Genome context |
|
Sequence |
000001 GCTGGTGCTG GGAGTAGGGC GCAAGATGTC GGCGGATGCA GCTCCGAGGA GGTAGGCAGT GGGAGCCGGC GTTCAGTCCG 000080
000081 GCCCGTGCCA ACAGTGGTTC CTCTCTCCCC CGTAGTTCGA GGAGACCACG CGCTGCCCCT CTGGCACGAT CGTGGATGAA 000160 000161 CCCCCTGGCA ACTGAAATGG GAAAGGCAGC GCCCCCGACT CTGGGGACTG GACCGAAGTC CACGGTAGTG ACAGCTGCCA 000240 000241 GACCCTGAGG AGAGGACGAG AAGACCCGAG GCCTCTGCTA CGAACACTGG CAGCCGATGG AAAATTCAGA CGGATTTGGG 000320 000321 ACAGTATGCA GAGTTCTCCA AGCGACAGAT TAACAGAGGC TCTTGAAGAA TAACTGCGTA ATCACGTGTT CTGCTCAAAA 000400 000401 GAAGGCCTGA ATGCCCAGTG CCTTATTTGG CTTTCAGGAC AGGGTCTTGC GGTGTCACCC AGGCTAGAGT ACAGTGGTGC 000480 000481 AATCATAGCT CACTGCTGCC TCAAACTCCT AGACTCAAGC AATCCTCCTG CTTCAGCCTC CCGAGTAGCT GGGACTACAG 000560 000561 GTAGATGATG GGCTCCACGG GAACAGAGCA AACGTTCGCT CCTGCTCCTA CACGGTGTTT CCTCTAAACC TGAGGCTCAG 000640 000641 CCGACTTGTC ATCACTTAAA ACCCAATTCA GAGCGGGGGG GCACTGCCAG TGAATAGTTC ATCACCGACT CAGTTTCCCC 000720 000721 ATGTGTATGC TGTGGTATTG GATCAGCAAC GAGATAAGAA GATCTCTCCC ATTTCCAAGC GTCTATGATG ATTCTGAGGC 000800 000801 ACAAGGTCAC ATTTGACAGT ACTAGGAAAC CCAGGAAACA AGAAGCAAAG ATGACAAAGG CTGTGTCTGC CTGGGCAGAC 000880 000881 GATCTATTTG GACAAGATAA TAGACCCAGG CATGGACATG CTCTCCAAGA AAGATGCCCT GACAGCTGCT CACACTGAAG 000960 000961 CTGAATCGAA CATTCCAATC CTTAGAGGTT CCAGCGAAGA TCTTGAAGTC TCCCTGAGCC ATTGACACAA TGGCCATGCC 001040 001041 ATCCCAGTGA TAAAACACAA ATTGTGGCCT TGTTTTGGAC AGAAATAAAG AGCCCAGTTT GTTAGTGATT TACTGATAA |
Predicted Small Protein
Name | ENST00000453671.1_smProtein_35:247 |
Length | 71 |
Molecular weight | 7397.409 |
Aromaticity | 0.0428571428571 |
Instability index | 73.5814285714 |
Isoelectric point | 12.3031616211 |
Runs | 7 |
Runs residual | 0.0448373408769 |
Runs probability | 0.0244404067933 |
Amino acid sequence | MQLRGGRQWEPAFSPARANSGSSLPRSSRRPRAAPLARSWMNPLATEMGKAAPPTLGTGP KSTVVTAARP |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHLLHHHHHHLLLLLLLLLLLL LLEEEELLLL |
PRMN | - |
PiMo | - |