ENST00000454595.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000454595.1 |
Source |
Gencode19 |
Same with |
lnc-SPRED2-6:1,NONHSAT071225 |
Classification |
antisense |
Length |
586 nt |
Genomic location |
chr2-:66666575..66668968 |
Exon number |
2 |
Exons |
66666575..66666821,66668630..66668968 |
Genome context |
|
Sequence |
000001 CCTCAGAGGT AGCAAAGAAG AGAAGGAAGA GGATGAGAAG AGACAACAGA GGTATGAACT TGTGAAACAA CCTCAGAGCA 000080
000081 GCATTCGAAA CATCAGCTGG GATGCACAGA ATTGCAACTA TTTACACAAA GCCAGCAAGT TATTAAGAAT GAACACAAGG 000160 000161 CTAGGGCGTT TGTGATCCCA GTTTTAGTGG CTGAAATTGT AATTAAACTG CGAAGAGAAA TGGACGCTAA GATTGGCCTT 000240 000241 GACACTAATT ACCAGAAAGA AAGACATTTA TGCAAATGTA TCAGAAGGCT GAACTTCAGC CATTCGGAAC CCTCCCCCCT 000320 000321 GTGTGTTTGG GGGTAAGGGA CCCAGGTGAC CGCTCACCTC CCCTTCCTCC TGGAGCCCTG AAGTCGGAGG CCCTGAGCCA 000400 000401 TGGACGGTAT CTGAGGATCG GTTTAGCGTA TCTGGCCGGA GAAATTGGCA ACATTTGCTA CGAATAAAAC CCAAGCGTTT 000480 000481 CCAGCAGCCA TTTTGAATTA AGTTTCCCAC CCGACAAGCC CTCGTCCCCT CCACTGCACA TCCAGGATCC GGTGGAGGAG 000560 000561 AAAGGCGCCG GGCGGAGAGT TGGGGA |
Predicted Small Protein
Name | ENST00000454595.1_smProtein_269:466 |
Length | 66 |
Molecular weight | 7057.1179 |
Aromaticity | 0.0769230769231 |
Instability index | 61.7215384615 |
Isoelectric point | 6.54425048828 |
Runs | 11 |
Runs residual | 0.0189423076923 |
Runs probability | 0.0241364359012 |
Amino acid sequence | MQMYQKAELQPFGTLPPVCLGVRDPGDRSPPLPPGALKSEALSHGRYLRIGLAYLAGEIG NICYE |
Secondary structure | LLLHHHHLLLLLLLLLLEELLLLLLLLLLLLLLLLLLLHHHHHLLLLHHHHHHHHHHHHL LEELL |
PRMN | - |
PiMo | - |