ENST00000454922.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000454922.2

Source

Gencode19

Same with

lnc-GGCT-1:12

Classification

intergenic

Length

1405 nt

Genomic location

chr7-:30617128..30625588

Exon number

4

Exons

30617128..30617707,30618847..30618930,30624327..30624424,30624946..30625588

Genome context

Sequence
000001 GAGGGCCCAT GCCAGAACCT GACCATGCTG GCACTCTGAT TTTGGATTTC TAGTCTCTAG AACTGTGAAT AAGTACGTTT 000080
000081 CTATTGCGTA AGCCACCCAG TCTATGGTAT TTTATTATGG CAGCCTGAGC TGACTAATAT AGGCTTCTAG ATTGGAAGGG 000160
000161 GAAGGAAGTA AAGAGAGAGA ATTGATAGGG ATAAAGAAGA GGCATCAAGA GACTTGGGGT ATCTGCTACT GAAGACATCA 000240
000241 GCTCTCTATG ACAAAACAGC ACAGCATGTT TGGAGTAAGA GAAAGCTGAA GTCTCAACAA ACAAATAGAT TCTTAATGTT 000320
000321 CTATACCACC GGACAAACTG CAGCCCTTTT ATACATATGG AGTACTTTCT GGGCCAGTCC TGTGGCCCCT TTCAAATGTA 000400
000401 TGGTGTTGAA ACGTAGTAAG TTTATGTTTT TAAGGTCTGC CCCTCCCTTC TTGCATTATA TCATAAACTC TTCTCTTTTT 000480
000481 TTTTTTTTTT GAGACGGAGT CCCGCTCTGT CACGCAGGCT GCCAGGCTGG CGTACAGTGG CGCAATCTCA GCTCGCTGCA 000560
000561 ACCTCCACCT CCTGGGTTCA AGCGATTTTC TTGCCTCTGC CTCCTGAGTA GCTGGGATTA CTGGCACACA CCACCATGCA 000640
000641 CAGGGAGATA TGAGACATCA ATCAATATAT GTAAGATGTA CATCAGTTTC GTCTGGAAAG ATGGGACAAC ATGAAGCAGG 000720
000721 GAGGGGGCTC CCTGGTGACA GTTCCTTGTT CAAAATGCCA AGAACCTGGA TGACTCATAG TCAAGACCCT CCACCAGTAA 000800
000801 CATATATTGG CGAGCCAGCC AGGAGACCAC TACAGGAAAC ACTCCATTTA TTCCACCTGA CTTCCCACTT GGCTGCATCC 000880
000881 TCAACCATTG AAATGAATTT GACCCTGATA ATCTAAGGAG GAAACATTTG ATATTCTTTT GCAATAATAC TTGGCCCCAG 000960
000961 TATTGTTTGG AATCTGGAGT TTGCTGTTGA ATGGGAAAGC AGGATGACGT TGCATGTATC CAGGCTTTGG TGCTGCTGTC 001040
001041 CTAAGAAGGG TCAGGCCTAG TCAGCATATG GTGCTCTCCT TTGGTGCTAT TTGGCTCCAG TGTCTTTGGA GTCTGAGGAG 001120
001121 GTTTGGCCTT TAAAAATCAA ACTGCCACCG GAACTGCTTT AAAAATGTTT GGTTCACAGC CTTCACTGGA TTACCTATTG 001200
001201 GAGCAAACAA AGTGTAACCA TGTAAAACCT GTGAGCTTGT ATTGATATCT CATGGCTAGA GTTCCAAGGT AAAAGCTATT 001280
001281 GGATCTTCGT TTGTGTGTGT GTATACATGT CTAGATGTGT TTATTTGTAT GTACACTTAT TGTTATATGT TGTGTCAACC 001360
001361 AAATCAGCTT ATAAATAAAA AAGCACTCAT AAATTAAATA AATAA
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Predicted Small Protein

Name ENST00000454922.2_smProtein_1013:1132
Length 40
Molecular weight 4521.3882
Aromaticity 0.153846153846
Instability index 89.2923076923
Isoelectric point 11.8297729492
Runs 6
Runs residual 0.0148944193062
Runs probability 0.0320025908261
Amino acid sequence MYPGFGAAVLRRVRPSQHMVLSFGAIWLQCLWSLRRFGL
Secondary structure LLLLLLLEEHHHLLLLHHHHHHHHHHHHHHHHHHHHLLL
PRMN -
PiMo -