ENST00000456363.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000456363.1 |
Source |
Gencode19 |
Same with |
lnc-RTN4-3:1,NONHSAT070744 |
Classification |
intronic(AS),antisense |
Length |
602 nt |
Genomic location |
chr2-:54888148..54889929 |
Exon number |
2 |
Exons |
54888148..54888512,54889693..54889929 |
Genome context |
|
Sequence |
000001 TCTTTTCACT TTTAAAGGAG AGTTGCAGGA GGGGAAATAG ACAAAAAACA AAACCCTGAG TCAAAATAAT GTGAGTGGAC 000080
000081 TTTAAAGGTG ACAAATCTTC TCTAGTGTGA GATTCGGAAA CTTCTGGTGA GGAGGAAGTA TGAGTTTGGT CTGGAAGGCC 000160 000161 TGAGCCAGGT GTGAGTCCAG AGAGACATGG GGTTAGTATG TAGAGAAACC AGGATAAAAA AAAATTTAGT GCTGCAGGTT 000240 000241 TCTGATTCCA CTGACACATC TAAATATGGC AAAAGAGCAA GTGAATGTCT CACAAGGTTT TGATGTATAA TATGGATTTG 000320 000321 GTTTTGTTTT TATCGGTACA AGGAAACCAT CTCTGTCACC AGCTTTTATT TCTAAGGAAA AGGATTTTTG TGAAAACATT 000400 000401 TTCAATTCCT GCTGGTGGCC TGATAGATAC CATCCTAAAA GCTTCCTTTA TCAGAGAATT CCACAAAAAG TCTTGAGAAA 000480 000481 ATGAACAATG AATCAGAAGA TTAATCCAAG ATGTACAGTG GAGTTTGTCT ACAGAGACAC TGACATGACT TCTGAAGCCA 000560 000561 GGGGGCATGC GAGCGCTCCC AGGCACGGTC CACCAAGTGC AA |
Predicted Small Protein
Name | ENST00000456363.1_smProtein_284:475 |
Length | 64 |
Molecular weight | 7332.7699 |
Aromaticity | 0.111111111111 |
Instability index | 44.1873015873 |
Isoelectric point | 10.1323852539 |
Runs | 11 |
Runs residual | 0.0296404275996 |
Runs probability | 0.0393521864111 |
Amino acid sequence | MSHKVLMYNMDLVLFLSVQGNHLCHQLLFLRKRIFVKTFSIPAGGLIDTILKASFIREFH KKS |
Secondary structure | LLLEEEEELLLHHHHHHLLLLHHHHHHHHHHLLLEEEEEELLLLLHHHHHHHHHHHHHHH HLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLL LLL |
PiMo | oooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiii iii |