ENST00000456749.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000456749.1 |
Source |
Gencode19 |
Same with |
lnc-TBPL1-1:3,NONHSAT115038 |
Classification |
intergenic |
Length |
1533 nt |
Genomic location |
chr6+:134797768..134825157 |
Exon number |
2 |
Exons |
134797768..134798068,134823926..134825157 |
Genome context |
|
Sequence |
000001 AATCTATCTG GTCAGATACT TAGTACCTAG ATGTGGAGAC CATATCTCAC AGTTCTGTCA GGCAGGAGCA GTCCAAACAC 000080
000081 TTTGATTATC AGCTGTCTCT TGCTCGGGAA ATTACTAGGT ACCAACACTG TTATATATGC AGAGGTGTCT GAAAAATGAA 000160 000161 TGCAGATCAA TTTCCAGTTC CACACAGAGC ACATCTGTAA AATATGACCT TTGGATAATG GCTGGAGTGT TTACCTGCAG 000240 000241 TATTCGTTTT TGCATGTGGC TTTCCCTAGA TATGTCAGGA TACAGCAGGA CCAAAACCTA GCCTTTGTCC TATGTCTGGA 000320 000321 GACTTCTTGG AAGCTGGAGC ACACAAATAG CTACAGCAAA CTTGAGGAAT GGGCATGAAT AGACTGGCTT CGGGGAACCT 000400 000401 GCCAGCTTGG CCGTGTGGCC AAGGTAATAG GCAAGCCAAG GCAGAGCTAG AGCTCAGAGC TGGAGGGGAA ATTAAAGCAG 000480 000481 CAAATGTAGA AACATTAAGC CTGAAGAGGC GACGACGTTG AATTCTAAAA TGCAGGCCAA AGCTCAGACT GCAAGCTGTC 000560 000561 TGGCTGCTCC GGGTGTGCCC AGAAGTCAAA GTCCAGCAGG GGCAAAGGTG GAGGTGTGGT CCTGCACGTG GGGTGTTGGG 000640 000641 GGGATGTGGA AGAGGAGGTG CTTTAAGATC CAGAGATTCC AGCTGCCCTG GTGCACCCTT GGAAGAATAA AAGGCTAGGA 000720 000721 ACTGGACAAG TCAGGCTCGA GTCCAAGCTG CCTGAGGAAT CGGGGAAAGA ATGGAGCTCA GAGTGGGAGG TCAGGGCAGT 000800 000801 ATTTAAAAAT CCAGGATAGC AGCAAAGCTG GCGGTGGCCC CTGACTCTGG TAAGGGCAGC CTGCAGCACC ATGCCAAGGG 000880 000881 GGGCCTGACT GATCATGCCC TGCATTTGCA AACAAGGATT AGTAGGGTAT GAGTAGGATT CTGCTGGTGC CTGGGAAGGC 000960 000961 AGTGCCATCT ACAACTTTAC AAAGTTTTAA CAAAGGCCTG AAGGACACAA CCTTCCCCAA AGTCCTGACG TCGCTGTTTG 001040 001041 CTGGCAACAA ATAGAGTCAA AAGAAGAGAG GCACAGAATG TGCCAGGGGT GTGCTGCGTA CAGCCCCGAT GACCACAAGG 001120 001121 CCTTCTTGGG TCAAGTTCTG CCATCTCTGG TTAAGATGGG CTCACCCTCT AGGACCCTGA TTGAGTCCTC GGACCACCAA 001200 001201 GAGTGCCCCA CCAAGAGCCT CCCTCTTCTG GTGACTCGTG CCTGCTTCCC GTGGAGAGCT CCAGAAGGGA GGAAACTGTG 001280 001281 AGGAGGTGGA GAACGTGGCA GGGATCCTAA CTTTCTTACT GAAGGAAGTT CTTCACAAGT ACCCATCTGC CTTCAGGGAA 001360 001361 GAAAACATAA CTCATTTTGG TCTTTCAAAT TCAGTTCTCA AAACCAAATC CTGTTGTCAG CAATCTGTGT CCCAACGCCT 001440 001441 TCTTCAGCAA CAGCATTTTC CCTGTGGAAT TAGTTTCCAA TGTTCTTTCT TAAATAAACC ACTGAAGATT AAAAGGAATC 001520 001521 CAGATACCCA CCA |
Predicted Small Protein
Name | ENST00000456749.1_smProtein_368:520 |
Length | 51 |
Molecular weight | 5477.2779 |
Aromaticity | 0.02 |
Instability index | 62.608 |
Isoelectric point | 11.2936401367 |
Runs | 9 |
Runs residual | 0.0153216374269 |
Runs probability | 0.0216098451393 |
Amino acid sequence | MGMNRLASGNLPAWPCGQGNRQAKAELELRAGGEIKAANVETLSLKRRRR |
Secondary structure | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLEEEEELEEELLLLEELL |
PRMN | - |
PiMo | - |