ENST00000456749.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000456749.1

Source

Gencode19

Same with

lnc-TBPL1-1:3,NONHSAT115038

Classification

intergenic

Length

1533 nt

Genomic location

chr6+:134797768..134825157

Exon number

2

Exons

134797768..134798068,134823926..134825157

Genome context

Sequence
000001 AATCTATCTG GTCAGATACT TAGTACCTAG ATGTGGAGAC CATATCTCAC AGTTCTGTCA GGCAGGAGCA GTCCAAACAC 000080
000081 TTTGATTATC AGCTGTCTCT TGCTCGGGAA ATTACTAGGT ACCAACACTG TTATATATGC AGAGGTGTCT GAAAAATGAA 000160
000161 TGCAGATCAA TTTCCAGTTC CACACAGAGC ACATCTGTAA AATATGACCT TTGGATAATG GCTGGAGTGT TTACCTGCAG 000240
000241 TATTCGTTTT TGCATGTGGC TTTCCCTAGA TATGTCAGGA TACAGCAGGA CCAAAACCTA GCCTTTGTCC TATGTCTGGA 000320
000321 GACTTCTTGG AAGCTGGAGC ACACAAATAG CTACAGCAAA CTTGAGGAAT GGGCATGAAT AGACTGGCTT CGGGGAACCT 000400
000401 GCCAGCTTGG CCGTGTGGCC AAGGTAATAG GCAAGCCAAG GCAGAGCTAG AGCTCAGAGC TGGAGGGGAA ATTAAAGCAG 000480
000481 CAAATGTAGA AACATTAAGC CTGAAGAGGC GACGACGTTG AATTCTAAAA TGCAGGCCAA AGCTCAGACT GCAAGCTGTC 000560
000561 TGGCTGCTCC GGGTGTGCCC AGAAGTCAAA GTCCAGCAGG GGCAAAGGTG GAGGTGTGGT CCTGCACGTG GGGTGTTGGG 000640
000641 GGGATGTGGA AGAGGAGGTG CTTTAAGATC CAGAGATTCC AGCTGCCCTG GTGCACCCTT GGAAGAATAA AAGGCTAGGA 000720
000721 ACTGGACAAG TCAGGCTCGA GTCCAAGCTG CCTGAGGAAT CGGGGAAAGA ATGGAGCTCA GAGTGGGAGG TCAGGGCAGT 000800
000801 ATTTAAAAAT CCAGGATAGC AGCAAAGCTG GCGGTGGCCC CTGACTCTGG TAAGGGCAGC CTGCAGCACC ATGCCAAGGG 000880
000881 GGGCCTGACT GATCATGCCC TGCATTTGCA AACAAGGATT AGTAGGGTAT GAGTAGGATT CTGCTGGTGC CTGGGAAGGC 000960
000961 AGTGCCATCT ACAACTTTAC AAAGTTTTAA CAAAGGCCTG AAGGACACAA CCTTCCCCAA AGTCCTGACG TCGCTGTTTG 001040
001041 CTGGCAACAA ATAGAGTCAA AAGAAGAGAG GCACAGAATG TGCCAGGGGT GTGCTGCGTA CAGCCCCGAT GACCACAAGG 001120
001121 CCTTCTTGGG TCAAGTTCTG CCATCTCTGG TTAAGATGGG CTCACCCTCT AGGACCCTGA TTGAGTCCTC GGACCACCAA 001200
001201 GAGTGCCCCA CCAAGAGCCT CCCTCTTCTG GTGACTCGTG CCTGCTTCCC GTGGAGAGCT CCAGAAGGGA GGAAACTGTG 001280
001281 AGGAGGTGGA GAACGTGGCA GGGATCCTAA CTTTCTTACT GAAGGAAGTT CTTCACAAGT ACCCATCTGC CTTCAGGGAA 001360
001361 GAAAACATAA CTCATTTTGG TCTTTCAAAT TCAGTTCTCA AAACCAAATC CTGTTGTCAG CAATCTGTGT CCCAACGCCT 001440
001441 TCTTCAGCAA CAGCATTTTC CCTGTGGAAT TAGTTTCCAA TGTTCTTTCT TAAATAAACC ACTGAAGATT AAAAGGAATC 001520
001521 CAGATACCCA CCA
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Predicted Small Protein

Name ENST00000456749.1_smProtein_368:520
Length 51
Molecular weight 5477.2779
Aromaticity 0.02
Instability index 62.608
Isoelectric point 11.2936401367
Runs 9
Runs residual 0.0153216374269
Runs probability 0.0216098451393
Amino acid sequence MGMNRLASGNLPAWPCGQGNRQAKAELELRAGGEIKAANVETLSLKRRRR
Secondary structure LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLEEEEELEEELLLLEELL
PRMN -
PiMo -