ENST00000458178.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000458178.1

Source

Gencode19

Same with

lnc-PPIL2-1:2

Classification

antisense

Length

3647 nt

Genomic location

chr22+:22292665..22297799

Exon number

2

Exons

22292665..22293985,22295474..22297799

Genome context

Sequence
000001 GCAGAGCGGA GGAGCAGCAG CTGCCACCGG CCGGAAGCCT GCTGGCTCGG CCGAGAACAA TGGCCGCCTG TCACTGTGGA 000080
000081 CAGCTGTCTC CCAGGCTAAG GCAAGGCTGC GCTCCCAGGG AATGCGGGCA GGGAGCCAGG GCGGAGGGCA GAGGACGAGA 000160
000161 GCGAGGAGGA GAGCGCGGGC ACCCACTGAT GCTGGCGGCC TCGGGTATTC GCTTTCTCTC TCTTCTCCCA CCTTGTTCCT 000240
000241 TTTCCCCGGA TGCACGCATG CACTAGTAAT GCCGAATTTA GAACAACAGG GAAAGGAAAG GAAATGGCAA AGGAAGGGAA 000320
000321 AGGAAATGGC CGACAGGAAA TGGCAAGGAA GGGAAAATCC ACTGCAACTC TGCTGCCTGC TGGCCTGTCC AGGGACAACT 000400
000401 ATTCAGCTGG GTGGGACGTT GCTACCCCCT TGTGGCACCC CTGCTGCAGC CTGCGATTCT TACGCCCTGT ATTTCTGGTC 000480
000481 TAACATCAAC CAACACTTTG GCGAAATATA ATAAAATGAA ATTACTAGGA GAATGAAAGA AAGTCACATG AAATAAAAGC 000560
000561 CCTGCTTTTT AATGATTATA TCCTCTGTGA AATGGATCTG CAGCCCTCTC CATTTCTGGG TTCCCCTGGC CACACCATGC 000640
000641 TTATGGCTGT CCCAGGAGCA GGCTGACAGA CAAGCTTCCA CCAGCATCTA ACCATGGGGC TCATGGACAC CGTAGAGCGT 000720
000721 CTCCACCCAA CAGAATCCTG ACTTGGGGGC AGCTGAGGCA GGGGGCCCGA GCGTTGAGGG GACCACGCTG CTGCCCCGAG 000800
000801 ACCTGCTGGC ATGCCACCTG GCCAACCCTG ACTTCGCCTG CCCGGGCGCA TGTTAACTGA GTTACAACAC TGAGGGCACT 000880
000881 TGAACCTGGC TGCATGACCA GAGATCGATC ACCTGTGAGA TCCTCTGTGA AACGGGATAA GCATCTTTAA TTTCCTGGGC 000960
000961 TGTTCTGGAA CTTCAGTCAG ACAGGACACA GGAGGGTGTC TGCACCACCC ACCCCTGCCT CGTGGGCTGA CTGGGAACTA 001040
001041 TATGACCTGT GGAGGGCTGT GACCGCCACC CTCCACCTCA CTGGGGCCGC AAGCCTTCTC TGCTCCTTGA TTCTGCTGCC 001120
001121 GTTGTGAGCG AGGGCCCCAG CACCCTTAGG GACCCCAATC AATGGGCTTC CCACAATGTC GTCACCCTTT GTTGCCTGCT 001200
001201 AAGCAGCCCT GGGGCCACCT CAGAAGAAAC AGAACTCACA GGTCACAGGG GCCTTTTCCT CCTCGTCATC GTCCTCCTCC 001280
001281 TCTTCTTCTT CCTCCCTGGG CAACTTCCTG AATTCGGAAA GGTGGGGTTT TGCTATGTTG TCCAGGCTGG TCTTGAACTC 001360
001361 CTGCCCTCAA GTGATCCTCC CATCTCAGCC TCCCAAAGCC CTGGGATAAT GGCGTGAGCC GCCACACCTG GCCGCCTTTG 001440
001441 GTCTGTTTGA AGAGGGACAT GGCATGATCA GATGGGGCTT TTAGGCCTCT CTGACCCTGG TGTGGAGGGT GGGCTGGCAA 001520
001521 GAAGGGGACG ACTGTCTAAA GGAGAGAGTC TAAGACCTGG GCTGGGCAGG GCCATGGTGA CAAACAGGAG CAGACAGAGT 001600
001601 CGGGCAGTAT AAATGGAGGG GCAGGGACAG TGTTGAAGTT TCTATTCTGA GCAACTAGAA GGCTCGTGGT ACAGTTAATT 001680
001681 ACCCTGATGG GGATGGAAGA GTCAGGCAGG GGATGGGCAA TGGGCTCTGT TTCCACAGCG ACTTGTGTTC CACGGAGGTC 001760
001761 AAGAGGCCTG AGGGCCTGCA AGAACATGGT CTGGGCAGGA GATGGAGCTG CGGAATGAAT GAGGATAGGG GGCTGAGTCC 001840
001841 CACAGGGCCA GAGCATGGCT AGCAAAGTGG GGATGACTCC AGGAGTGGCC TTCTGGGTGC CACGAAGGAA ATGTTTTAAG 001920
001921 AAGTGAGATT GGGTCACTGC TTTCAATGTC ATAGAACAGA GCTGAGCAGT TGAGGAGGCG TAGTGGGTAG AAAGGGAGGT 002000
002001 CGCAGCAGGC TGAAAGCAAA CCGACAGGAG GGTTAGCGTC TTTTAGCAGG TAGGCAGGGC AGAAGAGAGC CACGGGGCAG 002080
002081 ATCAGGGAAA GAAACACTGA AGCCATCTGT GGCTGAGAAG GAGGGCAGTG GGGAGGAGTG TCTAAAATTC TGAGCCATCC 002160
002161 CTGGCTTTTC TGGGCAGAAG GGGTCGCTCC CTCAGTGGCC CTATGGCCTC TAACATGCAT TTTGACCCCT GGAATCTGCC 002240
002241 TTCTCACCCA GTGGGGGCCC TGGAAGCTGG ACAACACACA TTCACCCCTG TGTGCCTGTC CCTGAGAGTG GGGGTCAGGG 002320
002321 GAGCATGCCT GGGGTGGCGA GGTGATTCTG CACTGGGCCG ACACTCCCGG CTTTAACTGG AAGGCGAGGA CCTTCCAACA 002400
002401 GCACAGGCTG ACAGGTCTTG TTCCATGGGG GCTGGGCACC CAAGGTATCT ACTGATGGTC TGAGGAATCT ACCGGGATGG 002480
002481 ATTCCTGATT TTTTTTTTTT TTTTTCTGAG ACGGAGTTTC GCTCTAGTTG CCCAGGCTGG AGTGCAATGG CGTGATCTCA 002560
002561 GCTCACCACA ACCTCCACCT CTCGGGTTCA AGTGATTCTC CTGCCTCAGC CTCCTGAGTA GCTGGGATTA CAGGCATGAG 002640
002641 CCACCATGCT CAGCAGATTC GTGATTTTTA AAATGAAAGG GTGACTCATG GGAGAAGCCT CTGGAACTGC CTTTGAAAAA 002720
002721 CAACCAGCCA AGACATGAGA AATTAGTTCC TCTGCCATTT GGGGGTTTCC TGCCAACTGC TGGGTTTTCC TTTTGCACAG 002800
002801 CAGGGAGGAA GGACGCCTGT TTCCCTTGGT CCCGGTGAGG CCAGGCCTCA GCTTCCTGCC CACCCGCCAC TGCTGCTGGG 002880
002881 GCAGGGAGGC AGTTTCCGGC TGTGGGGACC CAGACAATGC CTGGCCAAGG GCCACCATCG TCCTCTTCCT GGACACAGCT 002960
002961 CCCGCCTCAT CCCAGGGTCT GGCCTGGGAC ACGCCCTAGA GGCCCTCAGC CCTGAGTCAC TGCACCATGC AGATCCACCC 003040
003041 TGATTCTGGT CCCTGCAGAG CAGGCTCCTA CACAAGGCAA GAAGATGCTC CAGGGACAAG CCAAGGTGTA TGCAAGGCCC 003120
003121 AGGTGCCTGA GAAACACGTC TCACCGACCT TGGGGCAGGG GCTGTTACAA GAGGCTTATA GTCTAGTGGC AGAGACAAAA 003200
003201 ACCACACTCA AATCATTAGT GTACGGTATG CACTGCTCAG GGACTCAAAT ATGTGACAGG AGGCTCCAAA CAAGAGCGGA 003280
003281 GACAAGGCGT AAATAGCCCC CTGTGGACTG GATGTTCTGA CTCCTGGATG GCCTCCAGAA GGATGCCTTT TACGGTCTGT 003360
003361 GAAAGAGCTC AGGGACCAAG ATGCTCAAAG CCCTTCATGC CCAAGAGCCC CTCCTCAGGC TGGGACACGG GAAGCAGAGC 003440
003441 TCGGAGGTGG AACTCGTGAC TGTGTATGGG CACATGTGAG TGCGTGTGTG TGGACAGCCA GGCTTAGTGT AGACAACGTG 003520
003521 TGAGGCTCAG ACCCCAAGTG CTGACTACAC CTATGCACAT CCACACCTGC GTGTGAAAGA AGATGCTAGA AAAGAACAAA 003600
003601 AATAACTTAA AAAATAAATC CAATAAGATG GCTGGAACAT ATAACAA
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Predicted Small Protein

Name ENST00000458178.1_smProtein_3026:3295
Length 90
Molecular weight 9745.947
Aromaticity 0.0337078651685
Instability index 53.2505617978
Isoelectric point 9.07025146484
Runs 12
Runs residual 0.00837188808107
Runs probability 0.0319952305247
Amino acid sequence MQIHPDSGPCRAGSYTRQEDAPGTSQGVCKAQVPEKHVSPTLGQGLLQEAYSLVAETKTT
LKSLVYGMHCSGTQICDRRLQTRAETRRK
Secondary structure LEELLLLLLLLLLLLLLLLLLLLLLLLEEEEELLLLLLLLLLLHHHHHHHHHHHHHHHHH
HHHEEEEEELLLLEEEELLLEEELLLLLL
PRMN -
PiMo -