ENST00000460574.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000460574.1 |
Source |
Gencode19 |
Same with |
lnc-RP11-432B6.3.1-2:2,NONHSAT092963 |
Classification |
intronic(AS) |
Length |
508 nt |
Genomic location |
chr3-:159483176..159486243 |
Exon number |
2 |
Exons |
159483176..159483532,159486093..159486243 |
Genome context |
|
Sequence |
000001 TGCGTGCATC ACCACAACTA AGAGGAAGGA AAGAGCACTG GATGTGGAGT GAGGAGACAT GGATTCTGTC ACTACCCTGC 000080
000081 TCTGCAGAAC CCAATAGTAT GTCATTGAAA CAAAACAATA CAAAACCCTG TCTACAAAAG AAGACTCATA AGTCAACAAT 000160 000161 AACTCGGGTT TCATAAAGGA AGAAAGTCTT AGAGGAGGAA AATCAACCCA TTCAAATACA GGAGCATCTG CTTAACACAA 000240 000241 GACGGAACGA ACCCCGCTGC CAGACCGGTG GTGTGGGCAG GCGAATGTGT GCGTGTGCAT AGGAACAAGC CTATATATGG 000320 000321 ATGAGACATT AGTGGCAACG AGAGGAGAGC CACCACGATT GACAAAGCCA CAACTATTAC GATTTGAAAT ATCCCCCGCA 000400 000401 GGCACTGACT TTTGGTGCCA GAATCTCCCC GGATTTATTT TCAGGCAAGT GACTCACAAC CTGGTCTCCA TAAGTAATTC 000480 000481 CATTAAAATG AGTCGCCGGT TCCACTAA |
Predicted Small Protein
Name | ENST00000460574.1_smProtein_41:175 |
Length | 45 |
Molecular weight | 5034.7683 |
Aromaticity | 0.0454545454545 |
Instability index | 54.8022727273 |
Isoelectric point | 9.23797607422 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.03821889116 |
Amino acid sequence | MWSEETWILSLPCSAEPNSMSLKQNNTKPCLQKKTHKSTITRVS |
Secondary structure | LLLLLLEEEELLLLLLLLLLLLLLLLLLLHHHLLLLLLLEEEEL |
PRMN | - |
PiMo | - |