ENST00000460574.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000460574.1

Source

Gencode19

Same with

lnc-RP11-432B6.3.1-2:2,NONHSAT092963

Classification

intronic(AS)

Length

508 nt

Genomic location

chr3-:159483176..159486243

Exon number

2

Exons

159483176..159483532,159486093..159486243

Genome context

Sequence
000001 TGCGTGCATC ACCACAACTA AGAGGAAGGA AAGAGCACTG GATGTGGAGT GAGGAGACAT GGATTCTGTC ACTACCCTGC 000080
000081 TCTGCAGAAC CCAATAGTAT GTCATTGAAA CAAAACAATA CAAAACCCTG TCTACAAAAG AAGACTCATA AGTCAACAAT 000160
000161 AACTCGGGTT TCATAAAGGA AGAAAGTCTT AGAGGAGGAA AATCAACCCA TTCAAATACA GGAGCATCTG CTTAACACAA 000240
000241 GACGGAACGA ACCCCGCTGC CAGACCGGTG GTGTGGGCAG GCGAATGTGT GCGTGTGCAT AGGAACAAGC CTATATATGG 000320
000321 ATGAGACATT AGTGGCAACG AGAGGAGAGC CACCACGATT GACAAAGCCA CAACTATTAC GATTTGAAAT ATCCCCCGCA 000400
000401 GGCACTGACT TTTGGTGCCA GAATCTCCCC GGATTTATTT TCAGGCAAGT GACTCACAAC CTGGTCTCCA TAAGTAATTC 000480
000481 CATTAAAATG AGTCGCCGGT TCCACTAA
[back to top]

Predicted Small Protein

Name ENST00000460574.1_smProtein_41:175
Length 45
Molecular weight 5034.7683
Aromaticity 0.0454545454545
Instability index 54.8022727273
Isoelectric point 9.23797607422
Runs 7
Runs residual 0.00401069518717
Runs probability 0.03821889116
Amino acid sequence MWSEETWILSLPCSAEPNSMSLKQNNTKPCLQKKTHKSTITRVS
Secondary structure LLLLLLEEEELLLLLLLLLLLLLLLLLLLHHHLLLLLLLEEEEL
PRMN -
PiMo -