ENST00000462497.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000462497.1

Source

Gencode19

Same with

lnc-FEZF2-1:5

Classification

intergenic

Length

2556 nt

Genomic location

chr3-:62247500..62304598

Exon number

4

Exons

62247500..62249817,62302781..62302867,62303483..62303575,62304541..62304598

Genome context

Sequence
000001 ATAAAGGGCC GCCTTGGGGC GCGAAAAGTT CGTGAGGTGT AGTCGCGGCA ACCAGGAGGT GCACCCACCA CTAGAATTTG 000080
000081 AACATCCTAA GAACAGGTAT TTTTGTCTCT GCTTTGCTGA TGTATCCTCA GCAACCGGAA CTGCCTGACA TCTGATCCTT 000160
000161 TCTGTGAGAC ACCAGGCTGT TGAGGAAGAA TCTATGGCAA CATTGTATCT ATTAATATAC AGCTTCTGTA TTTATCAGAT 000240
000241 GGAGTCTCAC TCTGTCACCC AGGATGGAGT ACAGTGGCGT GATCTCGGCT CACTGCAAGC TCCGCCTCCT GGGTTCATGC 000320
000321 CATTCTCCTG CCTTAGCCTC CCGAGTAGCT GGGACTACAG GCGCCTGCCA CCACGCCCGG CTAATTTTTG TATTTTTAGT 000400
000401 AGAGACAGGG TTTCACCGCA TTAGCCAGGA TGGTCTCGAT CTCCTGACCT CGTGATCCGC CCGCCTCAGC CTCCCAAAGT 000480
000481 GCTGGGATTA CAGGCGTGAG TCACTGTGCC CAGCCAAGTT TAGTATTTTT TGTAGAGACA GAGTTTCACC ATGTTGGCCA 000560
000561 GGCTGGTCTT GCACTCATGG CCTCAAGTGA TCCACCTGCC TCGGCCTCCG AAAGTGCTGG GATTACAGGC GTAAGCCACT 000640
000641 GTGCCTGGCC TTAAATGGGT AAATTTCATA TGGTATATGA ATTATATTTC ACTAAAACTT TAAGAAAACA TTATACAGTA 000720
000721 CTGTTCAAAT TTTAAGTGGT CCAATTTAAA TGCACTATTG TATACAATTC TATGTAATGT CCTTACCATG GTATATGTTA 000800
000801 ACTATAAATA TCTATGCCCC TACCCTTAGT ATCAAAGCAT ATATTATATG CCAGTGAGCC AAGCCCCACA TGTCTGTGAA 000880
000881 ATGTGGTCTT CTAGCCATAG AAGTAGCTTG TGCTCCTAGG GTATTCCTTG AGGCTCTGTA TGAAGAATGT CCATTTGTTT 000960
000961 GAGTCCCTAA CCTACAGAAT ATTCCTGACC ATGGAAATGT GATAGATAGG AGTAAGCACA TGGACCAAAA GGCCTGGAGG 001040
001041 CTCATCATTT AAGGTACAAG CCAATTATGT AGTCTTTGAA AGAATGCTTT GAAATTCAGC TTGCTTGATT CAATTCCCAA 001120
001121 TATTTTCATT TGTATTAAAA GATTTGGCCC TTACAGGTTA AAAACAATGT CAGTGTAACC AAGTGACATT CAAATTTTGG 001200
001201 CTCCCAACAT GTGATATGAC ATCACTTCAT GTGAAAATAG CGAAGCTCCA AACATTTTCT TTCAGTCACC TTATTAAGCT 001280
001281 CGCTGAGCCC TGACAGCCTA ATGAAAGGCT AAGGGGGAAG AAAATGTCCC AACTTCTACA CTGTTGAAGA TGGGCTAATG 001360
001361 AGAGGTTAGC TTGCAAGAAT CATTCTTTCT TGGCATCCTG CTTCTGACTG CTTGGCTTTC AGCTTATACC CAGCATGAAA 001440
001441 ATTTAATTTC CTCGCAGTTG AAGGTAGTTT AAAGCTTATT ACTCACATGC TAAAATGTTG ATGTATCTGT TTTTGTGCTT 001520
001521 GTTTTCTGGA TGATTGGAAT GCTCTGCAGT GATGTTCATA TCAGCAGTAC AGCGCTGGAC TTCCTAGTGA AGAAAACAGC 001600
001601 AAGATTATAG ACACAGTTTA GAAACAAAGG AACACCATAT ACATTTAAAG GCATAAAGTA TTTACTCACT CCCTGGCCAC 001680
001681 AGCCACCGTT ACCTTCTCAA TCCCAACTTC GGATATAATT ATTGATATAT TTATAACGAG TTTATGAAGA ATGTGAAAAA 001760
001761 GGTATAAAGA TTTCATTATT TACTATTTCA TCAATCATCT ACTTTTTTCT AGTTTTTGAC CTAGTCCCTG AGATGTAAAA 001840
001841 CAATATCTCT TTTTGAATAC ATCATAGTCT ATGGGTGAGA AAAATATTCA AAAAGATAGT CAAACATGAT GAATACAAAA 001920
001921 GAGGCCTGAG AAAGCTCTGA TGGGAGCACA GAACAGAGGA AGGCTTTAGA CAGGTGAAAA AATTTACCTA AGTCTTAAAG 002000
002001 GAAGAAAGGG AATTTCTAAG AAGTATAATC TCTACCATGA TTTGCAATAT GCTTACAGGC CTTATAGCCT CATTTTATAA 002080
002081 TTGTGAGGGT GCATTGACTC TAAAGACTCA GTGCTGAAAT AACCCTAATA ACAGCCCAAC TAATGGTCAT ATCTCATATA 002160
002161 TACAGTCTTG ACAAATTATT TGTGAACTCT AGTATTTTAA AAGTTATCCT TCTTTGGAAA AATAGCAGTA GCAGAAATAA 002240
002241 CACTCTTATC CTACCTTGGC CGTGGATTTA AACGTCATCC ATTAGCCTAA TACAACGTTG CTGAAAAGCC AAATTTTTCT 002320
002321 ACACTATATG CTTCAAACCC AAGAAAGTAC TGGAGCTGAC TAATAAGGGA AGTCATTAGC AGTACACAGC TGCTACAAAG 002400
002401 AGCCTGAACA AAGTAACACA AAATTATCAG GAGAAATGTT TTACACAGAA CAGATGTAGC AGAGTTTAGA AGCATGCAGA 002480
002481 CTTTTTTTTT CCACAAAGGA GTTGCCTAGT AATTATGCAT GTTTTCCATA GTATTTACAT TAAACATAAT GAAAAC
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Predicted Small Protein

Name ENST00000462497.1_smProtein_263:454
Length 64
Molecular weight 6752.7405
Aromaticity 0.0634920634921
Instability index 46.5142857143
Isoelectric point 7.82537841797
Runs 14
Runs residual 0.0772594752187
Runs probability 0.037556464027
Amino acid sequence MEYSGVISAHCKLRLLGSCHSPALASRVAGTTGACHHARLIFVFLVETGFHRISQDGLDL
LTS
Secondary structure LLEEEEEEHHHHLLLLLLLLLHHHHHHHHLLLLHHHHLEEEEEEEEELLLEEELLLLHHH
LLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
LLL
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