ENST00000465215.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000465215.1

Source

Gencode19

Same with

lnc-NFKBIZ-1:1,NONHSAT090919

Classification

intergenic

Length

2051 nt

Genomic location

chr3+:101659703..101716770

Exon number

4

Exons

101659703..101659869,101679206..101679306,101713405..101713741,101715325..101716770

Genome context

Sequence
000001 AGAAGCAGAG ATAAAACAGA CTAAGTACAC AGAGGAGTTT AAGGTTTCGT GAATGTAAGT GCTGAGTACA GAATGGTGCT 000080
000081 CAATAAAAGC TTGTTAATTG ATGGACCACA GGTTTGTGAC AAGACTTCTC AGAGTCTGAT TCTTTCAAGG TGGGATATAA 000160
000161 GAGTAAGTAA ATGGCATGGG GAAAATCTGA TTGCCACAGA CAGAAGAATG AAACTGGATG CCTATTTCTC ACAATACACA 000240
000241 AAAGCGATTC AAGATTAAAG ACTTAACTAT ACCTTGACTA TGAATAATAG TTTCAATAAG GAAGACAGAA TGAGTTCTGA 000320
000321 CACGATGGTT GGGAGCTGTG ACAGGCAGAC GAAAAATGGA GCCAAATGGC ATGGAGGTGT GTCATCACTG CTGGATTTTA 000400
000401 CCTTGATCTA CATTCAGTTA TCTACTTCTT TTCAAAATGC TGGGCATTCA TTCAAGAAAC AGCATATATG TTCTGACTTT 000480
000481 GAAGTAATGG ATGAACTGTC ATGTGCAGTA TATGGAAATA AGTTTTATTA CCTTCTTCCC ACATTAACTC ATCCATCCAT 000560
000561 TCAATAGCCA TTTATTGAGA AGCTCACTCT GTGTTAGGCA CAGTGGTGTC ATGATGTTGG AACAGTAACA ATAACTCAAC 000640
000641 CAACCAGGGC TTGTCTGAAT ACAATCCTAC AGCAGCAGGA GCTGTGGAGA TATAGAAGGC AAGGAAGACC AGGTTGTGAG 000720
000721 GGAAGACGAA TTTACTCCCA GGAATGTTGG GATTGAGAGT AATATTCTCC AATAATGGTG GAAGACAGAA CAATAAAAGC 000800
000801 CCACCAGCTC CTTCTGCATG GTGGGATAAG AGAAAAGCCA AGGGCAGAAG TGAGAAAAAT AACCATCACC AAACTGAAAA 000880
000881 GAAAACCTTT ATAAAAAAAC TGGATTGATA AATGACCTTT AGTAGTGGAA AGATACCATT CCAATGAAGC ATGAATTGAA 000960
000961 AGGATTTCTT CTGAAAGCTA ATTTACATTT TTCTTTTTTT TTTTTTCATT TTCAGTGTGT TTTAGCAGGT GTATTGTTCT 001040
001041 ACATGGTTAG TTTCTTTACC TCTTTGAGAA AAATGGGTCA GCTTGACACA TCTGGATGAA AGAATCCGTT AGGTGATTAT 001120
001121 GATTGAAGAC AGATTAAGCC TTGTTATGAG GGGAATATTT GGGGGCTTAC CCTGAGGTGA TATTTGATGA TTTAGCTGTG 001200
001201 GGAGAATTTC CCTCCCAAGA TCAGCGTGAC TGACACTGAA ATTGCTACAG GGGAACCGGA CCTTTCCAAG AGGTGACAAG 001280
001281 GACATTTACC TGGTACAACA CAATGGTTCT GGACTGGAAG TCTAGTCCCA TTGATGAAGT TCCCAAAAGA TGTCCAGGTC 001360
001361 CTAATCCCTG GAATCTGTGA ATATGTCATC TTACACATCA AAAGAACTTT GAAAATGTGA TTGAGGTTAA GGACCTTGGA 001440
001441 ATGAGGAGAT TACCTTGGAT TATCTGGTTG GGTCCAAGCT AATCACATGA GTCCTTAAAG GAGAAGAACC TTTTTTAGCT 001520
001521 GGGTCAGAGA GAGATGTGAT GATGAAAACA GGCTCAGGGA GATGCACTGT AAGAAGGGCT TGACCAGTTG TTTTTGACTT 001600
001601 TGAAGATGGA GGGAAGGGCC AGGAGCCAAG GAAGGTGGGT GGCTTTTGGA AGGTGGAAAA AGCAAGGGAA CATTCTCTCC 001680
001681 AGAGCCTCCA GAAAGGAGCT CAGCCCTGTT GACATCTTTG TTTTTATTTT TTATTTTTAG TAGCATTGAG GTCTCACTAT 001760
001761 GTTGCACAGG CTGGTCTTGA ACTCTTGAGC TCAAGCACTC CTCCCGCCTT GGCTTCCCAA AGTGCTGGGA TTATAGGCAT 001840
001841 GTGCCACCAC ATCTGGCTTC CTACTGACAT CTTAACTTTA GTGCAGTGAG ACTCATATTT GAATTTCTGA CCTTATATTA 001920
001921 TAGAACCATA AGACATTATA GAATTATATA GAATTATAGA ACCATAAGAC AATAACTTTG TGTTGTTTTA AGATACTAAA 002000
002001 TTTTTGGTAA TTTGTTATGG CAGCACAATA AAACCAATAT AGCATTATAT T
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Predicted Small Protein

Name ENST00000465215.1_smProtein_743:907
Length 55
Molecular weight 6246.0481
Aromaticity 0.0740740740741
Instability index 60.5425925926
Isoelectric point 10.798034668
Runs 7
Runs residual 0.0330623306233
Runs probability 0.0383955383955
Amino acid sequence MLGLRVIFSNNGGRQNNKSPPAPSAWWDKRKAKGRSEKNNHHQTEKKTFIKKLD
Secondary structure LLLEEEEEELLLLLLLLLLLLLLLHHHHHHHHLLLLLLLLLLLLHHHHHHHHLL
PRMN -
PiMo -