ENST00000466089.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000466089.1

Source

Gencode19

Same with

lnc-NSUN3-1:3,NONHSAT090740

Classification

intergenic

Length

631 nt

Genomic location

chr3+:94657118..94708914

Exon number

5

Exons

94657118..94657170,94699214..94699383,94707390..94707523,94708173..94708278,94708747..94708914

Genome context

Sequence
000001 GACGGCCAGA AGTCCAGGGC TAGGAGCCTC AGCCGGCGGA CGCCAGGAAA CAGGAAAGTA TTTTATCAGA AGAATTCGTA 000080
000081 GAAGTAGAAT CTGTTTGTCT TCAGTTAAAC AAAAGAAGAA CCTCATTGCT TTCCAACTGG GCCCCGGCCA TTTTCCAGTT 000160
000161 GAAACATCAA ATATTTTATT TGTGTCTTTC ACTGCCAATT AAAGGGCAAC AGAAATGGTA CAGGCTCCCT CTGCAGTGGA 000240
000241 ATTACCCTTA TGTCTTTTCT GTCTATGCTG ATCCACCTGA TCTTGAACTG GTGCTATTCC ATGGGGAAAA TTGGAACATG 000320
000321 GGGCAATTAA CACTTTCTCC ACTTTATCCC ATCAACAGGA AATTGAAATA TAACCAACTA ACTCAGGAGA CATCATGGAA 000400
000401 GATGTCACAC AGTGAATGAT GATGAAGCAG AATTTTTAAA ATGTGTAGGA TTACGAGAAG TGGGGTCATT TTTCTTTGTG 000480
000481 TATGGTATTG CTGATGCAGT TTAATGCTCC ATTACTTCTA AATTTTCATC ATAAGCTAGA TTTTCCAGTT GTGGTTTCTA 000560
000561 TAAAGAAAAA CAAACATTCT GAAGACAGTT TTTCCAGATT TATTCCAGAT ATCGATGATT AACTTTTGAA G
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Predicted Small Protein

Name ENST00000466089.1_smProtein_317:418
Length 34
Molecular weight 3923.4745
Aromaticity 0.0909090909091
Instability index 51.903030303
Isoelectric point 9.39898681641
Runs 7
Runs residual 0.0279973649539
Runs probability 0.0375375375376
Amino acid sequence MGQLTLSPLYPINRKLKYNQLTQETSWKMSHSE
Secondary structure LLEEELLLLLLLLHHHHHLLLHHHHHHHHLLLL
PRMN -
PiMo -