ENST00000470449.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000470449.1

Source

Gencode19

Same with

lnc-SEC22A-2:3

Classification

overlapping(AS),antisense

Length

760 nt

Genomic location

chr3+:123304403..123349668

Exon number

3

Exons

123304403..123304648,123348341..123348528,123349343..123349668

Genome context

Sequence
000001 AGGTGCGCTT TGCTTCCTAA CCCGTTGCCG GGTTGGAGAT TCCACCTCCG AAGTTTTCTT TCTGACTTTT GATTTTACAT 000080
000081 TCCTAGTACA GTGGAGAAGC CCAGGCGGCC TAGAATCCAG TGTCGTCCGT GAGTGCTTGG CTGGTGTTCA AGTGCATCTT 000160
000161 CCAGCCTGAG ACCGCGTGGA CTCGCTCATC GTGAGGGCGA GAGGAGGATA AGCCCATTGG GCTGTCGGCT GAGAGTGAGG 000240
000241 TGCGGGATTG CTGATGAAAT CCTTGGCATC GTCGGAGATC TCATCGAATG CCTCGTCGTC GAAGTCCCAG GTGGCTGAGG 000320
000321 TAACGTTGGC CAAGGTTTCG TTATCGTTGT CTCCCATGAA GGGGGAAAGG CCACTGACTC TGGAGAGACA AGAGCAGGAC 000400
000401 AGCAGGTGTG GCTAGGAGAG GGCGCGACGA CCAGATGAGG GAATTGAGGC ACAGCCCAGG CTCAAGTCAC CTGCCCAAAG 000480
000481 ATTCACAGCC AGTGAGATTG GAAGCCAGGT ATCTGCCTCT AGAGCCTGTC CTCTTAAATG CTATACTATC CTAACATTTC 000560
000561 TGTAAAGATG AAGTAAATTG CAGTGTTCAG CACTGGCACC AGGCCTGGTC CACAGTAAGG AGGCGGTCCA TGCCCGGAGA 000640
000641 TCTCATGCAG TTCTGCTGGG TTCCCTCCAC TGCCTTACCA AGCTGTGAGT GCAGGAATGA CTTTGTGACC AGCAGCTTAA 000720
000721 GCCAAATAAA CTTTATAAGG TAAAGAATTT CAAAACAAAA
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Predicted Small Protein

Name ENST00000470449.1_smProtein_434:553
Length 40
Molecular weight 4421.0894
Aromaticity 0.025641025641
Instability index 76.4051282051
Isoelectric point 8.38250732422
Runs 7
Runs residual 0.0107466063348
Runs probability 0.0305095010977
Amino acid sequence MRELRHSPGSSHLPKDSQPVRLEARYLPLEPVLLNAILS
Secondary structure LLLLLLLLLLLLLLLLLLHHHHLLEELLLLHHHHHHHLL
PRMN -
PiMo -