ENST00000471502.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000471502.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
561 nt |
Genomic location |
chr9+:139694818..139723918 |
Exon number |
6 |
Exons |
139694818..139694945,139697116..139697238,139717977..139718111,139720231..139720278,139722946..139722998,139723845..139723918 |
Genome context |
|
Sequence |
000001 ACTGCGCCCT CGGTCCGCCC CAGATCATCC GCCAGCTGGA GAACAACATC GAGAAGACAA TGATCAAGAT CATCACCAGC 000080
000081 CAGAACATCC ACCTGCTGTA TTTGGACCTG CTGGATTATC TGAAGACAGT GCTGGCAGGA TACCCCATTG AGCTGGACAA 000160 000161 GCTGCAGAAC CTCGTGGTCA ACTACTGCTC AGAGCTGTCG GATATGAAGA TCATGTCCCA AGATGCCATG ATGATCACGG 000240 000241 ATGAGGTCAA GTGAAGATAG TGATCCGGGG AGACAGGAAC ACGGGCAAGA CAGCGCTGTG GCACCGCCTG CAGGGCCGGC 000320 000321 CGTTCGTGGA GGAGTACATC CCCACACAGG AGATCCAGGT CACCAGCATC CACTGGAGCT ACAAGACCAC GGATGACATC 000400 000401 GTGAAGGTTG AAGTCTGGGA TGTAGTAGAC AAAGGAAAAT GCAAAAAGCG AGGCGACGGC TTAAAGATGG AGAACGACCC 000480 000481 CCAGGAGGCG GAGTCTGAAA TGGCCCTGGA TGCTGAGTTC CTGGACGTGT ACAAGAACTG CAACGGGGTG GTCATGATGT 000560 000561 T |
Predicted Small Protein
Name | ENST00000471502.1_smProtein_59:253 |
Length | 65 |
Molecular weight | 7393.6976 |
Aromaticity | 0.0625 |
Instability index | 41.2421875 |
Isoelectric point | 4.51092529297 |
Runs | 7 |
Runs residual | 0.03921875 |
Runs probability | 0.0350518585814 |
Amino acid sequence | MIKIITSQNIHLLYLDLLDYLKTVLAGYPIELDKLQNLVVNYCSELSDMKIMSQDAMMIT DEVK |
Secondary structure | LEEEEELLLHHHHHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHLL |
PRMN | - |
PiMo | - |