ENST00000483650.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000483650.1 |
Source |
Gencode19 |
Same with |
lnc-FOXL2-1:2,NONHSAT092345 |
Classification |
intergenic |
Length |
865 nt |
Genomic location |
chr3-:138656750..138662845 |
Exon number |
3 |
Exons |
138656750..138657278,138661163..138661460,138662808..138662845 |
Genome context |
|
Sequence |
000001 TTTTTCTGCC GTGGTTCGTT CACAAGGCGC GACTGTAGGC AGAGGCTCCC TGTTCTGAAG CTGGCTGTCA GCACTCCCCC 000080
000081 AACTGCCGTC TCAAGCAGAG AAAGCAAGGG AGGGAAGCTT CCAGGACCAA GCCCTGGTGG GCAGGTAGCA GCCCACCTCC 000160 000161 AGTGAGACGG AGAAGTTGGC CGGGGCCAGC AATGAAGGAC CAGCCTGTCT CCTCCCCGAG AACTGAAAGG CAAAAGGCAC 000240 000241 CCAAGGCTGG GAAGAGAGCA GCAGCCTCAC CAAGTAAGGA AGACAAAATG AAGCAATCAG TGAGGGTTTC CTGGGTCTAC 000320 000321 ACAGGGATTG AAGGAGACAC TTCTGGGTGA TGCGAGTGCT GCGCAGCTCA GAACCCTTGG AAGCATGAGA GGAGGACGAG 000400 000401 CCCGGCGGCC TGCCGGTGCG GTGATGGAGG GCTCTTCGGT AGCCACACTG CGCGCCTCCC ACACACACCT TAACAGTCTT 000480 000481 GGGGCCCCGG GCCAGCGCTG CAGCCCAAAG AGACCCTGCA GCCGCATTTT CTCCCAGGCC GTGGCAAACC CTGGCTTCGC 000560 000561 CTCCCTTCAC CATGGCTTGT GAGGGCAGGA GGCTCCCGGG GGCCGACTTC CCTGACCTGA ATGAGTCAGG CACCCTTCTT 000640 000641 TATTTTAAGT GGGGGTGTGA CCTGAGGAGA TAAAGGAAGG ACGACAGACC TGGGGAGTGG GGCCCTGCAG CCTCTTGGGC 000720 000721 CCGGAGCGCA CTCCTTCTCG CTCCCTCCCC TCACCGGCAG GATCGGGGGT CTTGAAACTG GAGCCGCTCA CCGGCCGGCG 000800 000801 GATGAGAGAT AAAGGAGCCC GGCGGCGCCG AAGCGCTGAC CAGCAGACCC GGATCCGGAC TTTCC |
Predicted Small Protein
Name | ENST00000483650.1_smProtein_191:349 |
Length | 53 |
Molecular weight | 5663.321 |
Aromaticity | 0.0384615384615 |
Instability index | 74.7365384615 |
Isoelectric point | 9.99176025391 |
Runs | 9 |
Runs residual | 0.0227075184702 |
Runs probability | 0.0341419851223 |
Amino acid sequence | MKDQPVSSPRTERQKAPKAGKRAAASPSKEDKMKQSVRVSWVYTGIEGDTSG |
Secondary structure | LLLLLLLLLLHHHHLLLLLLLLLLLLLLHHHHLLLEEEEEEEEELEEELLLL |
PRMN | - |
PiMo | - |