ENST00000485384.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000485384.1

Source

Gencode19

Same with

lnc-TRAT1-6:1,NONHSAT091125

Classification

intergenic

Length

262 nt

Genomic location

chr3+:109366954..109529708

Exon number

3

Exons

109366954..109366982,109523629..109523673,109529521..109529708

Genome context

Sequence
000001 TTGATCCCAC CCCCATGGCG CCCAGCAAGG TTTTGAGCAC CTTTTGGATT AATGCCAGAA GAAATCCTTC AAAAGTCAAA 000080
000081 GCTCCATTCC ACTCTCTGGC TTCTGTGGAG GAAGGGCTGA ACTGTGCCTA GTTATTTTGA GGTTTGGGAC AAACCAAAGA 000160
000161 ATTGAGCATA GTGGTGAATC GTTTTGAAAT GAGAGACCTA GCCAAGGATA TGTTCACTTA GTAAGAGGTC ACATCTTCTG 000240
000241 CAAAATAAAA AAATCAATCA AA
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Predicted Small Protein

Name ENST00000485384.1_smProtein_14:130
Length 39
Molecular weight 4157.7753
Aromaticity 0.0789473684211
Instability index 61.7315789474
Isoelectric point 9.78216552734
Runs 7
Runs residual 0.0115997229917
Runs probability 0.0483004012417
Amino acid sequence MAPSKVLSTFWINARRNPSKVKAPFHSLASVEEGLNCA
Secondary structure LLLLLEELHHHHLLLLLLLLLLLLLLLHHHHHHLLLLL
PRMN -
PiMo -