ENST00000491909.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000491909.1 |
Source |
Gencode19 |
Same with |
lnc-SHOX2-2:1,NONHSAT092919 |
Classification |
intergenic |
Length |
466 nt |
Genomic location |
chr3-:157694350..157695925 |
Exon number |
2 |
Exons |
157694350..157694724,157695835..157695925 |
Genome context |
|
Sequence |
000001 GATATCTGTA TCTTTGTCAC TTGAGAGTTC ATGGGAAATT TAGAGACCCA AGAGCCTGAA TTCCGGTAGT TCAGAAGTGC 000080
000081 TCATAAGCAA GGAAAGGAGA GTAAGATGAT TTGGACACCA GGAAAAATGA ACACAGAGAG TGGCAGGAAA TGGAAATATT 000160 000161 TTCTTCAAGT CATAAGAAAT GGTGCCTGGC AATGTCAAGA AGCAGCAATT CCACTTAACT TCACGGTACT GCAAGCTACT 000240 000241 GAAAATGGTG TGGAACTGGT ATAAACTGGT ATAATCTACT TGGTGCGAAG GCAATAGTAT ATGCAACTTA AATCAAGAAA 000320 000321 CCAAATGCTC AGGGAAATGC AACGTACAAA GAAGCAATGG CAAATATATA TGTGTTGTTC TACTTCATCA ATTTTTCTTA 000400 000401 GCTGCTAGAG CATTTGAAAT TATTCTGTTC ACACTAAATA TTCTTAAAAT TATGTAAACT CTTTAA |
Predicted Small Protein
Name | ENST00000491909.1_smProtein_149:217 |
Length | 23 |
Molecular weight | 2517.8582 |
Aromaticity | 0.0909090909091 |
Instability index | 112.781818182 |
Isoelectric point | 9.30401611328 |
Runs | 5 |
Runs residual | 0.00909090909091 |
Runs probability | 0.0481363716657 |
Amino acid sequence | MEIFSSSHKKWCLAMSRSSNST |
Secondary structure | LEEEELLHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |