ENST00000501079.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000501079.1

Source

Gencode19

Same with

lnc-CTR9-3:2

Classification

intergenic

Length

1071 nt

Genomic location

chr11+:10879806..10900823

Exon number

3

Exons

10879806..10879913,10886808..10886874,10899928..10900823

Genome context

Sequence
000001 AGGTGATAGC GGAGCGGCTG GGTAGGAAGC AATTGTTCTC AAACTTCACT AGCCCCGTCG GCGCGGACGC TTGTCGAGAA 000080
000081 TGCAGATTCC TGGGTACTGC CAGATACGAA TTGAGCATAC CACAAAAAAG TTCTCATTTT GTGTCCTCCC ATCCCATTCT 000160
000161 CCTCACTAAC CAAAGGCTAG GAATTATCTG TGAATGTAGG ACCACTGGAT TTGCAGTCTT CATCTGACAC TGTGGAGAGT 000240
000241 TTCTAGGAAT GAAACAGATA TATGGCCTTG GGTCCCCTTT TTTTTTCTTT TTTTTTTTTT TAATAGAGAC GAGCATCTCA 000320
000321 CTATGTTGCC TAGGGTAGTC TTGAACTCCT GGCCTCAAGC AATCCCCACC CGACTCCGCC TCTCGAAGTG ATGGGATTAC 000400
000401 AGGCATAAAC CACCACGCCT GGCCAGAAGG TGCTTTAACA CCAAATCTGA AAATTGTTCA GAAGAGAAAC ATTGAGCATG 000480
000481 AACACCATCT GTGCGAGTCA TTTACTTATT GCCCCTCACC TCTAAATCTA CCTTCTGTAC TCTTCTTCCC TGTAATGATG 000560
000561 GGGCTAGTTG TCCTCAAACT GTTTCTCAGA CTTCTTTTTA AGCTTGCTTC CTGTTCAGTT CTGCCAATAG GGGTCACTAG 000640
000641 AGAGAGACTG GGAGGCAGAA GGAGAGAATA TGCTTCCTGT TTTTTCTGTT CTTGTTAATG TTGCTTACAG GACCAGCAAT 000720
000721 GCTTCTTCAC CTAGAGACAC TTCTCCCAGC AGTGGCAGTG CCACTTCAGC TTCTTTCAGC ACTACTGGAA TCAGCCTCAG 000800
000801 TGATTCCCCC TGTACCCGCT CAGAGATTAT CCACAGCAGC CAGATGGTTC TACCTTCCAC AAAGATTGTG GTTGCAATTC 000880
000881 TGGGCTTCTA AGTTCTGGTT ACTTCATATT TTTCCTTTTG TTCCTCCAGC CCTAGAGGTG GTAGCTGCTT TCTGAAGTTA 000960
000961 TTATTTCTAG ATGACTTTTG GTTTTTCAGC CTTTGTATTT TGCTTTTCAG CCCTCTAATG CCTGTATAAC CAATTTCCCT 001040
001041 GTAATAAATA AATTTCCTCC ATTGAAATAC C
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Predicted Small Protein

Name ENST00000501079.1_smProtein_554:697
Length 48
Molecular weight 5341.5234
Aromaticity 0.106382978723
Instability index 59.7936170213
Isoelectric point 9.92694091797
Runs 9
Runs residual 0.0252127659574
Runs probability 0.0546821331135
Amino acid sequence MMGLVVLKLFLRLLFKLASCSVLPIGVTRERLGGRRREYASCFFCSC
Secondary structure LLLHHHHHHHHHHHHHHHLLLLLLLLLEELLLLLLLEELLEEEEELL
PRMN LLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo i??????????????????????????????????????????????