ENST00000503266.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000503266.1 |
Source |
Gencode19 |
Same with |
lnc-PDE5A-2:2 |
Classification |
intergenic |
Length |
550 nt |
Genomic location |
chr4-:120720244..120725670 |
Exon number |
5 |
Exons |
120720244..120720391,120721792..120721917,120722507..120722549,120723879..120724047,120725607..120725670 |
Genome context |
|
Sequence |
000001 ATGAAGGAAA ACATCAGAAG AAACAGGTTA AAGAATTAGA TGTGGTCCTC ACAGGGAATA TTTGCCCCTG GCCGCAGATA 000080
000081 CAAAGGATGC ATTTCAAGCT CTCCCAAGAA CTCTTGCAGT GCTCCATCCC TGTGTCCTCA GAAATGGCCC TGAGTCTCAG 000160 000161 CAGCTCAAAA AGACTCCAGT TGGATAGTGA GAAGCCACTG CTTCCTTGCA AGAACCTTCC CAAATTTCTC TAACCATGTG 000240 000241 AAGACATGCT TGATTCCCCT CACCTTCACC ATGATTTTTC TGGGAGAATA ACAAAAAGAA GGAAGATTCA GTAGGAAAGG 000320 000321 AAAGCAATGA AGAAGCCAAG AAAGAGACAA GGAACCCCGG AAAGAGAGTC AGCAAAGAGA GAAATAGAAA CATTAATTTC 000400 000401 AGGTGAAGAA ACTGAAGACT TTAGCCAGAG CCAAGTGGCT AATTCAGAGT TTAATACACC TTTGACCTCA AACCCTTTGT 000480 000481 GGTCACCTTT GAACAGTGCC TCCCTCTCTG AAATAAAATA CTGGTTCTGT CATTAATTAT TAATTATTGA |
Predicted Small Protein
Name | ENST00000503266.1_smProtein_326:535 |
Length | 70 |
Molecular weight | 7943.7202 |
Aromaticity | 0.0869565217391 |
Instability index | 70.6463768116 |
Isoelectric point | 5.76861572266 |
Runs | 7 |
Runs residual | 0.0378820490745 |
Runs probability | 0.0377898907311 |
Amino acid sequence | MKKPRKRQGTPERESAKREIETLISGEETEDFSQSQVANSEFNTPLTSNPLWSPLNSASL SEIKYWFCH |
Secondary structure | LLLLLLLLLLLHHHHHHHHHHHHLLLLLLLLLLLLLEELLLLLLLLLLLLLLLLLLLLLL LLLEEEELL |
PRMN | - |
PiMo | - |