ENST00000504132.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000504132.1 |
Source |
Gencode19 |
Same with |
lnc-AIMP1-1:7,NONHSAT097715 |
Classification |
intergenic |
Length |
521 nt |
Genomic location |
chr4+:107354781..107374605 |
Exon number |
4 |
Exons |
107354781..107354911,107355769..107355858,107370168..107370244,107374383..107374605 |
Genome context |
|
Sequence |
000001 AGAACAAGAG AGGGTGGGAA AATAAGAAAG GAAAATAGAA CATTTTAGGG AAAGGGAATA GTGTGTGCAA AGATGAAGAA 000080
000081 GTATAAAAGA AAATGTAGCT TATTCCAGAA ACTGCTAAAA GGATCAATAT GCTGTCGTGT CATGAGAGAG CCACAATTCT 000160 000161 TCAAACATAT TTAACTGCTG GAGAGAATGG CTCAGAATCC CAGGTATCAG CTTCAGCACA CAGATAAAAT ATAAGAAAGA 000240 000241 ATTTGAGGTT GATGTCAGAA GCATTTCCAA CAGGGCTAAG GAAGTATTTT TTTGGAAGAT CTCTTCTTGG CCCTTGACAG 000320 000321 AAGAAGCAGA GTAACTTTTC TTAGGTGGCA TAATTCTTCA AAATGTGTTC ATTTTGAAGA ACAGGGGTGA TGGATGGTAA 000400 000401 TACACAGGCA GGGATCAACA GTCCCAGAAC TGAAGGAAGA GTTGACAAAT GTATCAAAGA TGCCTAATCA AAATGTGTCC 000480 000481 ACATTCTGCT AAATAAATTC TGGTTGAGCA GAACTAACAA A |
Predicted Small Protein
Name | ENST00000504132.1_smProtein_128:226 |
Length | 33 |
Molecular weight | 3448.7542 |
Aromaticity | 0.03125 |
Instability index | 52.2625 |
Isoelectric point | 5.98101806641 |
Runs | 6 |
Runs residual | 0.00414540816327 |
Runs probability | 0.0430872048521 |
Amino acid sequence | MLSCHERATILQTYLTAGENGSESQVSASAHR |
Secondary structure | LLLHHHHHHHHHHHHHHLLLLLHHHEELLLLL |
PRMN | - |
PiMo | - |