ENST00000504206.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000504206.2

Source

Gencode19

Same with

lnc-CYB5R2-3:6,NONHSAT017778

Classification

intronic(AS)

Length

4433 nt

Genomic location

chr11-:7458858..7482575

Exon number

4

Exons

7458858..7462950,7471604..7471673,7479027..7479190,7482470..7482575

Genome context

Sequence
000001 TCTTGAAGGG CTCAGTGTGG TCAAAAGAAG ACTATAGAAT CAAGGATGAA GAGAAGGAAC ACAGAATAAA AGGACGTCTC 000080
000081 AGCAGGAAGC TCTGTGACTA CTATGTAATT CTTACAATAC AGCAAATGAT GCCATACAGT GAAGCACCTT GAAAGATTGC 000160
000161 TGGGATAAGC TGACAGCATG GCAGCCAAAA TAGTGACCCC AGGCTTGCAG GAATTCTGTG CTTTCTGGAG GAAATGGTCA 000240
000241 TGGGTTTCCC AACCTGCCTT TTAAACTAAG GACCGAGCTG AAGAAGCCCC CGTCTTCCAG CGCATGTTAT TCCCATGACA 000320
000321 GATGCTAAAA GTTCAAGGGG AGAGCTACAA GAAGTGCGTT TTCCTGTGGC TACTTTCATG TCTGGATGCA ATGCCTAGAC 000400
000401 CTGCATCCAT CTTGCGACCA ACCTGAAGAT GAACAGAAAG GAAGGAAGGA TGGCCCAATA GCCTGGGAAG AACTGGTGTT 000480
000481 CCTGATACCA TCATTAACCA CAGAATCTAC AATCCCGGAA CCCCCCATCC TTAACCATGG AATCTACAAT CCTATCTCTA 000560
000561 GACCCTTTGT CCAGATGCTA CAGTTTCTTT GTTCAATCTA GTTTGTGTCA GGATTTCTGT TCATTACATC AAAAGTATTC 000640
000641 TAATACTTGT AGCAAAGCAA CTGGAGAAGT TTTCACTTTG TCTTTAACCA AAGAAGACTT CCAGGAAACA TCTCCTCAGT 000720
000721 GGGTTTCTCC CTCACCACTG GATTTTTATC TCTGTACTAG TGCTTTGATT TGTTTTAGGA GTCTCACCTC TCCACCTGTC 000800
000801 ATATTTCCCT GGCAGGCTCA TTTCTGCTAA TGCCCACAAT ATGTGTATCA ATGAGCTTTC AACGTTAGGT ACACAGCTCT 000880
000881 TCAGGCATGT ATAGCACATT AATCTGTCTG CTTCTAAGTG GTCTGTTGAC ATGTTTGGGT GCCAGTTATA TCTACAAGGC 000960
000961 TGTGATCATT GTCCTGGGTT ATTCTGTTTG TTCTCTCTGC AGGATGCATT AGGACACCCA AGGCCATGGC CATCACTTAC 001040
001041 ATCTAGGATT CAATCTTATC TCCTGTGAAT CACTGGAAAC CTCCTGTCCT GGAACCCTTT TTTTCCACAT CCCACTGGAT 001120
001121 GTCATTCATA GCAACTGGTC TTGTGGGTTG TCTATTTTAT TGTGTTGTCT TACTCTTCCT CCTGGTATCA GTTTTTAAAT 001200
001201 CCTCTTGATG AGATCAGCTG ATCAGTCGCT AAGCAACATA GTCCCCCATG TCTTTGTAAG ATTCTCTGCA CTCATGGCTA 001280
001281 GAATGATTTA TTCTGGTATC TTAAGCTGTG TTTCAGAACC TCATTCTAAA TATCAACCTA TTCTTGTAAG TCCACTACTG 001360
001361 ATCATCTTTA GATATTCTTC AGTCTTCCAG AGTTCCAAAG GGCAGTAGGA AGAAGCAATG AAAATACCAC CTGTATTCTC 001440
001441 ACATCTTTCA TTGTTCCACT CAAAAAATAC CACCATGTTC ACTTCTGGTG GAACGTTTAT GTCCATGAGA AGCAGTGGCT 001520
001521 TTGAAGAGTT TTGGCAGACT ATGGCGCCTT ACTCAACATT GGGAAGGTAT CTTGCCATCA GACCTTTTGG GTCTCCATGA 001600
001601 AACTTCTTAT ACCCCCTCTG GGAAAAGTCA CTAACTGTGA TCTTACTGAG CTTCTAAACA CAGCATTTTT TTTACACTTA 001680
001681 AGTGAGCGGG GGTCCTCCTC ATTTGTGCTT CTCTTCTTGT AAGGGTGACT TCCTCCCAGT AGGATGAATC TCATGCCTAT 001760
001761 TTGTGTTATT TTGCTAATTC CAGCTTCTTT TCTACTCAGG GGGGTTCCAA CTCTTTTAAG GTCTCATCTT CAGCACTTCT 001840
001841 AAACTGTGGG AAACTATGTG AAAACAAATG GAGTGGCCAA ACACACCATT CATCACTGTG CTTCTGGACA GCTGCAAGTC 001920
001921 CATACGTGTT CTGGTGAGTC TTCAGGTTGT ACGGGAACAG AGGCTGAATC AAGGCAGTTC AGTGAGAGTC TAGATGGGAG 002000
002001 TGCTTATGGT GTTCTATAAT AAAGTACTTA TGGAACAATA ATAGAAATGG ATTCTTAGAG AAGCCCAAGA GAAGGAACTA 002080
002081 TGATTGCCTC ATTTCCCTGA CATTTCTAAG TTTGGTGGCA TAATCTAATT GACCCAACCC ACCTTGGGGT GCCAGGCCAT 002160
002161 GTCATAAGTC ACTGGACAGC CCATAAACAG CTTTCTGGGA GCATGTCCCC ATCTTGATCC AATCACCTGT GGCCAGGACA 002240
002241 TTTTACAAAC CTCGGTGGTT AGGGCTGCTT GTTCAACAGA TATTAGGGGT GAAGTTGTAC ATGCATGCAG GGGAGGCTGA 002320
002321 GATGGTAGGC ACCGTGAATA ACATGTTCCA GGGTGGGCTC TGCCTCTTGT CTGCTCTGTA ACATACCCCT GCTTCCTTGT 002400
002401 CCTGACCTCT CATTTGCTAA AGTCTGATTT CCAGCTTTGA AGTCTCTGCT CAATCTCTCC AGCCTTCTGC TCATGTCTTC 002480
002481 ACCTCCTACC TTGCAGCCTG TCTTTTGACT TGATGTTGCT TGACTGCAAT TCCTGTGACT TGGCCTTGGG GTCCACTCCC 002560
002561 ATGAAATGCT TCTCTGGCAG CCTTGGCAGG TGTGTCCCAG TGTTCCTGAG TTCCAGTGTT CCTGGCTGTG TCCTTGCACC 002640
002641 AGAGCAGGCT GCTTGAGATT AGACACGCTC CTCCCTCCTA TCAGTCCACC TTGGCTCTGA CACTTTCCTC AGCCTCCTTT 002720
002721 TCTTTGTCTG CTGGAGCACA GCAAAGTTTC CCAGAAGGTT TAAATTTACA TTCTTGGTCA AGGTCTCACA CCATCATGAC 002800
002801 ACTGAAGCAG ATAGAGTGAC TTCCTTCTCT TCTAAGCTGT GTGCATGCCT CCATGCCCCT ACTAGTTTGT ATAATTCCAG 002880
002881 TTTCTATAAT TTCTTCCATT CTTTCCTGAA ACTTTGTGCT TTCTGTTAAA GTAGGTTTTT AGGGATATTT TTCAGGTCGG 002960
002961 TTCATCCCTC TGAATGTCTT GGGTTTGTCT GATTGAAGCC AAATGGACAC AGTGAGTGTT TCCTTTCTGA GTGGAGGGAG 003040
003041 GTGGCTCTTG CATCACCTTT GGGTCCTTTA GAGCTTTAGA GTAAATGCTC AAAGACTGCC CACAGCTGGA TTTGCTGGCT 003120
003121 GTGAATTAGA TCTGGGAGGA GAGGACTTAG CAGGAAAAAG CTTCTGTATC TAATGCTGAA ATCAGAGATG AAGTCTGAAC 003200
003201 AGAAGTGCGA CATCCAAGAG TCAGGGGCGG GATGTAGGAG GTGCATGGGA TGACAGGGGC GGGGCTCTGA TCTGAGAAGG 003280
003281 GCAGTTTCAA TGTGCACAGC AGAGCACTGG GGAGGGGATG TGTTGTTCCA TACAAGCTGA TGGAAGTTGA TAGAAGAATA 003360
003361 GGAACAAGGC TTGGATGGTG GCAAAAGACC TACCTGCACC AATGTGAAAA AAGGGGCCCT TTCAAGGCTG AGCCAGGTTG 003440
003441 GAAGAGGGCA GAGCTGCTTC CAGGACACCA GAGAGTGCAG CAAGTATGCA GAGAAAACCT GGGCACCAAG AGACCTGGGA 003520
003521 GAGAGGAGGC AGATGGGTGG GCCAAAGTTC TGGTAGTTGG GAAAGGTGAT AGAAAGCACT GCATTAATGC TGGGTCCTCT 003600
003601 GCCCTTGTAC TAAGAGCAGC ACATGGCTGC CTCTGAATCC TGCCCATGGA GTAACATTTG CTTCCATATG CCACAAAGAT 003680
003681 GAGATGGGGC CCTGATGTGC CTGTTATAGG AGGGCAGAGC ATCCTGTGTG CTCTGTGAGA AGAGCTGGGC CACGTATCTC 003760
003761 CAGGTCAAAG CCCGCACAGC AGTTATCCCC TCCCTCTCTT GTATCTTCAA CCTTTCCTTT CCTATTGGGA AGGATTTCCG 003840
003841 TATTTCCAAG AGCCTGCTCA AGTGGGGTCA GCATGTGTCT CTGGTCACCA CCCTCTCCCC TGTGGAAGGC TGACAACTCT 003920
003921 CCCATCTATA CAAAATTTGA AACCACCAAT TATATGATTG ACACTATTAC ACTGGAACAA TTTCCTGTCA GACTCCCCCA 004000
004001 CCAGACTCTT TACAGGCCGG TGCTTCATCT ACATCTCTCT GTCCACAGCA CTTGGTGTAG TATTCGCAAC CTAGCAGGAA 004080
004081 TGAAAGAGTC CGTGTGGAGT CAAGCACCTC AGGGAACCCC TTGAAAGCAG TGACACATAC CTCCAACAAG AATTGCCTCT 004160
004161 TCCTTCCTTC TGTGGCTTTG CACAGCATTT TTCTTTAATT ATAAACACAG TTGGTCTCTC TATGCTGTTT AGGCTAAGCA 004240
004241 CAGCACAGCT TCAAACTGGA AGGTTAAATA TTTGTGGTAA AAATAACTTA TTTGTGCCCA TGCAAATGTG GCAACACAAA 004320
004321 CTCAGGCATG TAGTGTTCTA TGCAGAGAAG CTAAAACCAA GGAATGACAT TAATTTCCGG TGAAAATATG TGATGACAAT 004400
004401 CTTAGAATTC TGGCTTTTCA GAAAAAAAAA AAA
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Predicted Small Protein

Name ENST00000504206.2_smProtein_536:829
Length 98
Molecular weight 11021.4553
Aromaticity 0.144329896907
Instability index 58.8712371134
Isoelectric point 5.04107666016
Runs 17
Runs residual 0.0437189767087
Runs probability 0.0451385641697
Amino acid sequence MESTILSLDPLSRCYSFFVQSSLCQDFCSLHQKYSNTCSKATGEVFTLSLTKEDFQETSP
QWVSPSPLDFYLCTSALICFRSLTSPPVIFPWQAHFC
Secondary structure LLEEEELLLLLLLEEEEEEHHHHHHHHHHHHHHHLLLLLLLLEEEEEEEELLHHHHLLLL
LEELLLLLLLLHHHHEEEEELLLLLLLLLLLLLLEEL
PRMN -
PiMo -