ENST00000506059.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000506059.1 |
Source |
Gencode19 |
Same with |
lnc-MED10-12:2,NONHSAT100144 |
Classification |
intergenic |
Length |
456 nt |
Genomic location |
chr5-:4775589..4805882 |
Exon number |
2 |
Exons |
4775589..4775994,4805833..4805882 |
Genome context |
|
Sequence |
000001 GGAAGAATTT TCTTAGAACC AAAAGGCATG GAATTGATGA CATGAAACTG CCTGAGCTTC TCAGCTGACC TGTGATGGAG 000080
000081 TGTTGTGCCC AAGTGGAAAG TTCTTCTTTC TTTCAGAGAC ATATCATTCA CCATAAAATA CAACCAGAGA CTTCAAAATT 000160 000161 ACTCCAGGCT AGAAGGACAC TCCAATTAGG GGAAAAGTAA CCTATGGGCA AACCATCTTC CGTAAGAGTT CAAGGACAAA 000240 000241 AAACTACTGA TGTTGTAATA ACATTGAAAC TTAATGTTTT GGGCAATCCT TAAGTGATTT ATTTGGAGTG TCCCAGTCAT 000320 000321 TTTAGACCTC TTCACCTTAC AATGTATTGT GTGAGATTAT ATTTCCATGC ACCTAATTTT AAAATAAATT TATTTAGGTA 000400 000401 GATGTAGAGA CATATTACTG TGATAAAGCA GTTCATACCA AATAAAATTT AGCTAA |
Predicted Small Protein
Name | ENST00000506059.1_smProtein_74:199 |
Length | 42 |
Molecular weight | 4809.5121 |
Aromaticity | 0.0487804878049 |
Instability index | 89.756097561 |
Isoelectric point | 8.84283447266 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0406540994776 |
Amino acid sequence | MECCAQVESSSFFQRHIIHHKIQPETSKLLQARRTLQLGEK |
Secondary structure | LEEEEEELLLLHHHHHHHHHLLLHHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |