ENST00000506149.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000506149.2 |
Source |
Gencode19 |
Same with |
lnc-C8orf74-1:1,NONHSAT147617 |
Classification |
antisense |
Length |
821 nt |
Genomic location |
chr8+:10586824..10622233 |
Exon number |
3 |
Exons |
10586824..10587140,10611712..10611828,10621847..10622233 |
Genome context |
|
Sequence |
000001 CCGCTGCGTG CACCAAGTGC TTTGAAAGTT TTTCGCGGAT TAAAACGAAT AAAAACCTCG TCGAAAGGCA AAGAAGGCAG 000080
000081 GGTTGAAAAG TACTCAGCTC GACACCGGAG AAAAAAGAAA CCCCCATAGG AACTCCGGTT GTTCGGGTGT GTCCTAACAG 000160 000161 CCTCACTCTG GACCTCTTGG ACCTGGTGAG TCCGTGTCCC CAGTCCCTGC GGGGACAGCT CAGGAAGAGA GCGGGTTCCA 000240 000241 GGACAGCCCA AGCATCCGAA TCAAGTTATC TACACCTTCG AGACTGAGCA ATAGATGAAC GAATCGAGTC TATTTGGGCA 000320 000321 TTTTCCAGGG GAAATGAAAG TGTATGCCCA AAGAAGGACT TGTATTTCAA TGTTCGTAGA AGTTTTATGC ACAAGAGTCC 000400 000401 AAAACTGCAA AAAAATCCGA AAGTTCATCA ACTGGGATGG TGTGAAGTGT CTACAGGCAT CCGAGTGAAC CCAAAGGGAG 000480 000481 AGTTTGGCTG GCACACGGGG AGACGGGCCA AGGCGCGGCG GGCGAGGGCG GCACAAGCAT GGCGCTGCGA CACCACTGCT 000560 000561 GGGAGCAGGG CTGAAAGGTG TCTTTTGCTG TAAGGACTTT CATAAGGCAG TCCCAATCCA AAGACTGGCT TTAATTTCAC 000640 000641 GGCCTTAGCC TCTCAGTTTC TTAAGCCTTC TGAGGACCTC CTGATCATGA CAATTAAGTC ACTATTTACA GCCATGTGAC 000720 000721 AGATAAATCA GTATTAGGTG ATTTGTTCTG AAGGACCCCC AAAAGGAAAC ATATGAGAGA ACCCACACTC GGCACAGGAA 000800 000801 CGGCAAGAGT CCTCCTGTGA G |
Predicted Small Protein
Name | ENST00000506149.2_smProtein_386:592 |
Length | 69 |
Molecular weight | 7709.8514 |
Aromaticity | 0.0588235294118 |
Instability index | 52.7044117647 |
Isoelectric point | 11.243347168 |
Runs | 11 |
Runs residual | 0.0212639109698 |
Runs probability | 0.0411828941241 |
Amino acid sequence | MHKSPKLQKNPKVHQLGWCEVSTGIRVNPKGEFGWHTGRRAKARRARAAQAWRCDTTAGS RAERCLLL |
Secondary structure | LLLLLLLLLLLLEEELLEEEELLLEEELLLLLLLLLLLHHHHHHHHHHHHHHHLLLLLLL HHHHHHLL |
PRMN | - |
PiMo | - |