ENST00000506149.2

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000506149.2

Source

Gencode19

Same with

lnc-C8orf74-1:1,NONHSAT147617

Classification

antisense

Length

821 nt

Genomic location

chr8+:10586824..10622233

Exon number

3

Exons

10586824..10587140,10611712..10611828,10621847..10622233

Genome context

Sequence
000001 CCGCTGCGTG CACCAAGTGC TTTGAAAGTT TTTCGCGGAT TAAAACGAAT AAAAACCTCG TCGAAAGGCA AAGAAGGCAG 000080
000081 GGTTGAAAAG TACTCAGCTC GACACCGGAG AAAAAAGAAA CCCCCATAGG AACTCCGGTT GTTCGGGTGT GTCCTAACAG 000160
000161 CCTCACTCTG GACCTCTTGG ACCTGGTGAG TCCGTGTCCC CAGTCCCTGC GGGGACAGCT CAGGAAGAGA GCGGGTTCCA 000240
000241 GGACAGCCCA AGCATCCGAA TCAAGTTATC TACACCTTCG AGACTGAGCA ATAGATGAAC GAATCGAGTC TATTTGGGCA 000320
000321 TTTTCCAGGG GAAATGAAAG TGTATGCCCA AAGAAGGACT TGTATTTCAA TGTTCGTAGA AGTTTTATGC ACAAGAGTCC 000400
000401 AAAACTGCAA AAAAATCCGA AAGTTCATCA ACTGGGATGG TGTGAAGTGT CTACAGGCAT CCGAGTGAAC CCAAAGGGAG 000480
000481 AGTTTGGCTG GCACACGGGG AGACGGGCCA AGGCGCGGCG GGCGAGGGCG GCACAAGCAT GGCGCTGCGA CACCACTGCT 000560
000561 GGGAGCAGGG CTGAAAGGTG TCTTTTGCTG TAAGGACTTT CATAAGGCAG TCCCAATCCA AAGACTGGCT TTAATTTCAC 000640
000641 GGCCTTAGCC TCTCAGTTTC TTAAGCCTTC TGAGGACCTC CTGATCATGA CAATTAAGTC ACTATTTACA GCCATGTGAC 000720
000721 AGATAAATCA GTATTAGGTG ATTTGTTCTG AAGGACCCCC AAAAGGAAAC ATATGAGAGA ACCCACACTC GGCACAGGAA 000800
000801 CGGCAAGAGT CCTCCTGTGA G
[back to top]

Predicted Small Protein

Name ENST00000506149.2_smProtein_386:592
Length 69
Molecular weight 7709.8514
Aromaticity 0.0588235294118
Instability index 52.7044117647
Isoelectric point 11.243347168
Runs 11
Runs residual 0.0212639109698
Runs probability 0.0411828941241
Amino acid sequence MHKSPKLQKNPKVHQLGWCEVSTGIRVNPKGEFGWHTGRRAKARRARAAQAWRCDTTAGS
RAERCLLL
Secondary structure LLLLLLLLLLLLEEELLEEEELLLEEELLLLLLLLLLLHHHHHHHHHHHHHHHLLLLLLL
HHHHHHLL
PRMN -
PiMo -