ENST00000506476.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000506476.1

Source

Gencode19

Same with

lnc-ASTE1-1:1,NONHSAT092129

Classification

intronic(AS)

Length

591 nt

Genomic location

chr3-:130772161..130791183

Exon number

3

Exons

130772161..130772523,130773312..130773429,130791074..130791183

Genome context

Sequence
000001 CTTTAATCCA CCTCTGCATG TGATCATCTG CATTTGACTC CTTGAACTAT GGCAGCCAGC TGGAGCCATG AAGTAAGCCA 000080
000081 CCCTAACATG AGTGGCAGAA ACATGGAGAG ACAGGGTTTC ACCATAATGG CCAGGCTGCT CTCCACCTCC TGGGCTCAAG 000160
000161 CGATCCACCC ACCTCAGCCT CCCAAAATGT TGGGATTGCA GATATGAGCC ATAGTTCCCC TCCATCAGCC CAAATGTCAG 000240
000241 TTCCTGGAGT ACAAAGGCGG TGGCTGCTTC AGATGCTTCA GACTGAAACT GCTCTTTGCC ATTCTCATGG ACACTGGAGA 000320
000321 GTTAAGTTTG GTTAAATTGA TGCCTTTTTC TTTTAAAAAA GAAAGAATAC ACATATACCT TTGTGTACAC ACAAGCTAGG 000400
000401 AAACATCAAT CTAATACATG GATGGCAAGA AAAACCAGAT CTGGCTCATG CCAGTTACAA TGGTCTGTGA AGATAAAAAG 000480
000481 ATTTCTTCAG ATTTATTTCT CAGCCAATTT CTGCTTTTCC TAGGGAGAAA TTAAAAGTTT GTTAAATACC TATGTTTAGC 000560
000561 CTTTTATTAA TTTAGCCGGT GAAATTAAAA G
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Predicted Small Protein

Name ENST00000506476.1_smProtein_203:334
Length 44
Molecular weight 4900.6075
Aromaticity 0.0697674418605
Instability index 111.323255814
Isoelectric point 10.7631225586
Runs 5
Runs residual 0.0410243010191
Runs probability 0.032803391627
Amino acid sequence MSHSSPPSAQMSVPGVQRRWLLQMLQTETALCHSHGHWRVKFG
Secondary structure LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLEEEEEL
PRMN -
PiMo -