ENST00000508911.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000508911.1 |
Source |
Gencode19 |
Same with |
lnc-ATP8A1-1:1,NONHSAT096194 |
Classification |
intergenic |
Length |
394 nt |
Genomic location |
chr4-:42301029..42393285 |
Exon number |
2 |
Exons |
42301029..42301328,42393192..42393285 |
Genome context |
|
Sequence |
000001 AGAGAGGCCA GCCCCCATTC CTGGGGCTCC CCGAGGAGCT GGCTTTCAGC AGGGTTTAGA GCAGCACGAA AAGTGAACTG 000080
000081 ACCCTGGAAA AATGGTAATC TTCTCATCTG TGAGGATATG GAACCCCAAC CTCTTCCTGG ACACCTGATG ATCTGCTTGT 000160 000161 GATGGGCTCA GAGTCTTGAA ACACAGAACT ATGAGCTCAT CTCATATCCC AATCCAGCAG CATGGAAACC TCAGACTGCA 000240 000241 AGGCCCAAGA CTGGCACTTG TTCTCTCCCA ACTCTTTTCT TTCTCTCTCT CCTTTCTTTT ATCCCTTAAT TCCTTCTTGC 000320 000321 TTCCTTCCAA GATTTATACT ATTACCTTTT AGGCAAAACA TCCTGAACAT GTAAAATAAA CTAATTAAAA TCAA |
Predicted Small Protein
Name | ENST00000508911.1_smProtein_221:373 |
Length | 51 |
Molecular weight | 5923.9012 |
Aromaticity | 0.18 |
Instability index | 88.9922 |
Isoelectric point | 6.50201416016 |
Runs | 7 |
Runs residual | 0.0246783625731 |
Runs probability | 0.0423448658743 |
Amino acid sequence | METSDCKAQDWHLFSPNSFLSLSPFFYPLIPSCFLPRFILLPFRQNILNM |
Secondary structure | LLLLLLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLEELHHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PiMo | oooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiii |