ENST00000509640.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000509640.1

Source

Gencode19

Same with

lnc-SAP30-5:13,NONHSAT099272

Classification

intergenic

Length

673 nt

Genomic location

chr4+:174451609..174462981

Exon number

4

Exons

174451609..174451690,174452118..174452229,174457999..174458121,174462626..174462981

Genome context

Sequence
000001 GGATAATGCA AGTGTTTAAC AGATGCTTCA CTATTAAAAT ATTTTCCCCC CAAGTCTCAA ATATTGAAGA ATCTCTAACC 000080
000081 AGGGACACCA GTCCCTACGA AGACCTTGGG CGATTTTGAA GTGCGGGCAC CTCGATTCCC CGAATCTGTA GTGTGGCTGG 000160
000161 TATCGGTGTT CCCCTGGTTT AACTAGCCTG TTTGAAGGCA CAGATCATTC ATGGGGATGT ATAACCGAAA CCAGTCCTCT 000240
000241 CCACCGCCTG GGGATCTTCA CTTTCGCAGT CTACGACTGC CTGTGACTCC AGAAAGACAA ACTGCAGATT GGCCAAGTGC 000320
000321 CTTTCAAACT GTTTTTTACT GGATGAAGAA ACTCAACCAA GAAAATATAT GTCGATTCTT GTATATGGGA CAATATTAGC 000400
000401 TGCTGTGATT TTTAATACTA GCATAAAATA TAAGAATCTT TTTATTACTG TGATATTGTT TTTTCCTAAA TGAATGCATA 000480
000481 GTGTAACAAT TGGTGTCAAA AAGCATTGAA TTTTTTTCAG ATGGATTAAG CTGGAATAAT AAAGTATATC TATGAGATGA 000560
000561 TTTCTGTAAA CTCTGACTTG CTGAGAAAAA AGTGAAAAAG CTTTTTCTGG AAGAAACATG GCAACTTAAC CGTTATTAAT 000640
000641 CTGGACTAAA TAAAACAGGA AACTGCTTCT TTA
[back to top]

Predicted Small Protein

Name ENST00000509640.1_smProtein_5:118
Length 38
Molecular weight 4369.885
Aromaticity 0.135135135135
Instability index 64.8567567568
Isoelectric point 4.93572998047
Runs 7
Runs residual 0.009422266303
Runs probability 0.0442627501452
Amino acid sequence MQVFNRCFTIKIFSPQVSNIEESLTRDTSPYEDLGRF
Secondary structure LLEELEEEEEEEELLLLLLHHHHHLLLLLLLLLLLLL
PRMN -
PiMo -