ENST00000510416.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000510416.1 |
Source |
Gencode19 |
Same with |
lnc-PET112-2:1,NONHSAT098773 |
Classification |
intergenic |
Length |
579 nt |
Genomic location |
chr4-:152826084..152849800 |
Exon number |
3 |
Exons |
152826084..152826465,152827184..152827273,152849694..152849800 |
Genome context |
|
Sequence |
000001 CTGGTTGCTG ACCCCACACT CCTCAAGTCC TCTGTCTGCA GGATACTAGG ATGCTGACCT TTCATCATTC CACTGACGTT 000080
000081 ATGTGGCCTA AAATCCTCAG CCTGAAGACT CAAATTATCG AAACTTCAGA GGAAAAATTT AAACTTTCCT ACACCAGAAT 000160 000161 CAGCTTGAGA GAAGAACCTA GTTGCCACCC CAGCCAGACA CTCCCTTGCA CCATATTTGC TTGTCTAATG ATGTACTTGC 000240 000241 TTAGAAGTTC CAGGGGCTAA TCTTGAAATA AACCAGGCAT AGAGATCCAG TTGTGGAAGT CTCCCCCACC TAGAAATTGC 000320 000321 CTCAAGGTGG TTAATCTTCA ACCCAACCAT TGTCAAAATG GCCCCAGTTC ATTCTACAGG TGGACAACAA CTCAAGATAG 000400 000401 CCATTGGAGC AAGATATGCC GACCTCCACC CTGCACCACT CCCACATGCT TCCCATACCA AGTTTCCCTT CCCAACCCCC 000480 000481 TTCGCTTAGC CTGAAAATTT GAGATGGTTC TTTGAGACCT AAGTCCAGCC ATTCTTCTCA ATGGCTAGCC TTTGAATAAA 000560 000561 ACTGCTTTCC TCCATTCCA |
Predicted Small Protein
Name | ENST00000510416.1_smProtein_50:259 |
Length | 70 |
Molecular weight | 8063.4218 |
Aromaticity | 0.0869565217391 |
Instability index | 79.947826087 |
Isoelectric point | 8.57269287109 |
Runs | 12 |
Runs residual | 0.0345817190415 |
Runs probability | 0.0455013837367 |
Amino acid sequence | MLTFHHSTDVMWPKILSLKTQIIETSEEKFKLSYTRISLREEPSCHPSQTLPCTIFACLM MYLLRSSRG |
Secondary structure | LEEEELLLLLLLHHHHLLLEEEEELLHHHEEEEEEEEELLLLLLLLLLLLLLHHHHHHHH HHHHHHLLL |
PRMN | - |
PiMo | - |