ENST00000511385.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000511385.1 |
Source |
Gencode19 |
Same with |
lnc-FAT1-3:1,NONHSAT099689 |
Classification |
intergenic |
Length |
2114 nt |
Genomic location |
chr4-:188225237..188230836 |
Exon number |
4 |
Exons |
188225237..188225621,188225792..188226855,188228260..188228423,188230336..188230836 |
Genome context |
|
Sequence |
000001 GCAGTGGTCT GAAATTGAAC TCACAATATT TCTGAGGCAT GCCTGTACTG CCCTCTCCCA AGAATGCCTA CGTGACCAGC 000080
000081 CCTCAGACTG GATCTTCTGC CTCCAAATTA TGTTTGCAGT TCATGTAGCA GGCATGACAG ACTTCGATTC TAATAGTTGC 000160 000161 CTTCTTGCAA TCTCTAGTAG CTGCAGCAAC CTCCCACTGC AGATGTCTAT TGTGAATCTG GGCCCCTGGC CCTTGGTCTA 000240 000241 CATCTCACGT ACATTCAGCC TTCTTGCACT TCCAGCCTCT TCTCCTTGTG GCTCTCTTGC CCTGTCACTT TGCTTATGTG 000320 000321 CACTGTGGCC AAAGCTAAGG CACCAGGGAG CATCAAGAAA AGACAAACAT CTGTGAGTTG GATATGTGCC AATATTGATA 000400 000401 TTCTCTTATA CCTCAATGCC CTGTGCTAGA GTGTCAGAGA GGAAGCGCAG AATGCAGCCA TACTTCTTTT CAACCTACTG 000480 000481 GTCAAATTTG GGTGGTTCAA GTGATCTGAA ACTGAGCTCA CAATATTTCT GAGGCATGCC TGTACTGCCC TCTCCCAAGA 000560 000561 ATGCCTACGT GACCAGCCCT CAGACTGGAT CTTCTGCCTC CAAATTATGT GAGAGACTGA GAGCTCTCTC TCTTCATTTC 000640 000641 CTCGTAAGGC CACCAAACCC GTCAGCACCT ACTTACCTGA CCATTGTCTC AACTACAGCT GATGGGATCC ATGACAGAAG 000720 000721 CTTAACCAAA ACTAGCCCAT GAGATTGTTT TTCTCAGGAA TGTAGAAATG AGGCAGAGGT TAGCCACTGT CCGTGTGCTC 000800 000801 TGGAGCTAAA CGCATGTAAG TGTAAGGGTT CTCTTCTGTC CTAAGCTGAC ACAGGCTGCA GAGAAAAGTG GTTGATGCTG 000880 000881 CCAGTCAGAG AGAAGCAGAT GAAGGAGCCA TGCAGCCTGG AAGGCGAGAG GAGGGCCAAG AAAATGAGCT TGGTTTCCAA 000960 000961 CGGGTTCCGC AATTGCTATT TTCGGTGGCT GCTGAGCCCA GGTGCTGTTT CTTCACTTGA GCTCCATGAC CCTCCCTGTG 001040 001041 TGGTGGGTTG AACGGTGACC TCCAAAAGAT ATGTCCACCT GGAACCTCAG AATAAGATCT TATTTGGAAT AGTCTTTGTA 001120 001121 GATGTCAGTA AGGTAAAGAT TTGGAGATGA GACCCTCCTG GATTAGGGTA GGCCCTAGGT CCACTGGCAG GTGTGCTTCT 001200 001201 CAGGGTCTGA AAGGGGAAGA CAGGGCCACC CAGAGGAGGA GACGGAGGCA GAGACAGGGC CACCCAGAGG AGGAGACGGA 001280 001281 GGCAGAGACA GGGCCACCCA GAGGAGGAGA CGGAGGCAGA GACAGGGCCA CCCAGAGGAG GAGACGGAGG CAGAGACAGG 001360 001361 GCCACCCAGA GGAGGAGACG GAGGCAGAGA CAGGGCCACC CAGAGGAGGA GACGGAGGCA GAGACAGGGC CACCCAGAGG 001440 001441 AGGAGACGGA GGCAGAGACA GGGCCACCCA GAGGAGGAGA CGGAGGCAGA GACAGGGCCA CCCAGAGGAG GAGACGGAGG 001520 001521 CAGAGACAGG GCCACCCAGA GGAGGAGACG GAGGCAGAGA CAGGGCCACC CAGAGGAGGA GACGGAGGCA GAGACAGGGC 001600 001601 CACCCAGAGG AGGAGACGGA GGCAGAGACA GGGCCACCCA GAGGAGGAGA CGGAGGCAGA GACAGGGCCA CCCAGAGGAG 001680 001681 GAGACGGAGG CAGAGACAGG GCCACCCAGA GGAGGAGACG GAGGCAGAGA CAGGGCCACC CAGAGGAGGA GACGGAGGCA 001760 001761 GAGACAGGGC CACCCAGAGG AGGAGGCGGA GGCAGAGATT GGAGTGATGC TGAGACAGGC TGGGCCGAGG TCCGCCAAGG 001840 001841 GCTGCCAGGC AGCCACCAGA AGCTGGGAGA GAGCCAAGCA AGGACCCCCC GCTGAGCCTT CCGAGAGAGC GCGGCCTGCT 001920 001921 GACACCTGGG TGTCAGACTT CTGGCCTGCA GACTGTCAGA ATAAGCTCCT GTTGTTTTAA GCCACCTGGT TTATGGTAAT 002000 002001 TTCTTGCAGC AGACCTAGCA AATTAATAGA CCCCATAGTC CTGTAATTCA TTTTGCTTAA ACGAGCATGA ATAAGATTTA 002080 002081 GTTTTGCTAA TAAATAAAAG TTACTTCACT AAGA |
Predicted Small Protein
Name | ENST00000511385.1_smProtein_38:127 |
Length | 30 |
Molecular weight | 3083.5998 |
Aromaticity | 0.0689655172414 |
Instability index | 94.8172413793 |
Isoelectric point | 9.18743896484 |
Runs | 5 |
Runs residual | 0.0271551724138 |
Runs probability | 0.0351174704116 |
Amino acid sequence | MPVLPSPKNAYVTSPQTGSSASKLCLQFM |
Secondary structure | LLLLLLLLLLEELLLLLLHHHHHHHHHHL |
PRMN | - |
PiMo | - |