ENST00000511385.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000511385.1

Source

Gencode19

Same with

lnc-FAT1-3:1,NONHSAT099689

Classification

intergenic

Length

2114 nt

Genomic location

chr4-:188225237..188230836

Exon number

4

Exons

188225237..188225621,188225792..188226855,188228260..188228423,188230336..188230836

Genome context

Sequence
000001 GCAGTGGTCT GAAATTGAAC TCACAATATT TCTGAGGCAT GCCTGTACTG CCCTCTCCCA AGAATGCCTA CGTGACCAGC 000080
000081 CCTCAGACTG GATCTTCTGC CTCCAAATTA TGTTTGCAGT TCATGTAGCA GGCATGACAG ACTTCGATTC TAATAGTTGC 000160
000161 CTTCTTGCAA TCTCTAGTAG CTGCAGCAAC CTCCCACTGC AGATGTCTAT TGTGAATCTG GGCCCCTGGC CCTTGGTCTA 000240
000241 CATCTCACGT ACATTCAGCC TTCTTGCACT TCCAGCCTCT TCTCCTTGTG GCTCTCTTGC CCTGTCACTT TGCTTATGTG 000320
000321 CACTGTGGCC AAAGCTAAGG CACCAGGGAG CATCAAGAAA AGACAAACAT CTGTGAGTTG GATATGTGCC AATATTGATA 000400
000401 TTCTCTTATA CCTCAATGCC CTGTGCTAGA GTGTCAGAGA GGAAGCGCAG AATGCAGCCA TACTTCTTTT CAACCTACTG 000480
000481 GTCAAATTTG GGTGGTTCAA GTGATCTGAA ACTGAGCTCA CAATATTTCT GAGGCATGCC TGTACTGCCC TCTCCCAAGA 000560
000561 ATGCCTACGT GACCAGCCCT CAGACTGGAT CTTCTGCCTC CAAATTATGT GAGAGACTGA GAGCTCTCTC TCTTCATTTC 000640
000641 CTCGTAAGGC CACCAAACCC GTCAGCACCT ACTTACCTGA CCATTGTCTC AACTACAGCT GATGGGATCC ATGACAGAAG 000720
000721 CTTAACCAAA ACTAGCCCAT GAGATTGTTT TTCTCAGGAA TGTAGAAATG AGGCAGAGGT TAGCCACTGT CCGTGTGCTC 000800
000801 TGGAGCTAAA CGCATGTAAG TGTAAGGGTT CTCTTCTGTC CTAAGCTGAC ACAGGCTGCA GAGAAAAGTG GTTGATGCTG 000880
000881 CCAGTCAGAG AGAAGCAGAT GAAGGAGCCA TGCAGCCTGG AAGGCGAGAG GAGGGCCAAG AAAATGAGCT TGGTTTCCAA 000960
000961 CGGGTTCCGC AATTGCTATT TTCGGTGGCT GCTGAGCCCA GGTGCTGTTT CTTCACTTGA GCTCCATGAC CCTCCCTGTG 001040
001041 TGGTGGGTTG AACGGTGACC TCCAAAAGAT ATGTCCACCT GGAACCTCAG AATAAGATCT TATTTGGAAT AGTCTTTGTA 001120
001121 GATGTCAGTA AGGTAAAGAT TTGGAGATGA GACCCTCCTG GATTAGGGTA GGCCCTAGGT CCACTGGCAG GTGTGCTTCT 001200
001201 CAGGGTCTGA AAGGGGAAGA CAGGGCCACC CAGAGGAGGA GACGGAGGCA GAGACAGGGC CACCCAGAGG AGGAGACGGA 001280
001281 GGCAGAGACA GGGCCACCCA GAGGAGGAGA CGGAGGCAGA GACAGGGCCA CCCAGAGGAG GAGACGGAGG CAGAGACAGG 001360
001361 GCCACCCAGA GGAGGAGACG GAGGCAGAGA CAGGGCCACC CAGAGGAGGA GACGGAGGCA GAGACAGGGC CACCCAGAGG 001440
001441 AGGAGACGGA GGCAGAGACA GGGCCACCCA GAGGAGGAGA CGGAGGCAGA GACAGGGCCA CCCAGAGGAG GAGACGGAGG 001520
001521 CAGAGACAGG GCCACCCAGA GGAGGAGACG GAGGCAGAGA CAGGGCCACC CAGAGGAGGA GACGGAGGCA GAGACAGGGC 001600
001601 CACCCAGAGG AGGAGACGGA GGCAGAGACA GGGCCACCCA GAGGAGGAGA CGGAGGCAGA GACAGGGCCA CCCAGAGGAG 001680
001681 GAGACGGAGG CAGAGACAGG GCCACCCAGA GGAGGAGACG GAGGCAGAGA CAGGGCCACC CAGAGGAGGA GACGGAGGCA 001760
001761 GAGACAGGGC CACCCAGAGG AGGAGGCGGA GGCAGAGATT GGAGTGATGC TGAGACAGGC TGGGCCGAGG TCCGCCAAGG 001840
001841 GCTGCCAGGC AGCCACCAGA AGCTGGGAGA GAGCCAAGCA AGGACCCCCC GCTGAGCCTT CCGAGAGAGC GCGGCCTGCT 001920
001921 GACACCTGGG TGTCAGACTT CTGGCCTGCA GACTGTCAGA ATAAGCTCCT GTTGTTTTAA GCCACCTGGT TTATGGTAAT 002000
002001 TTCTTGCAGC AGACCTAGCA AATTAATAGA CCCCATAGTC CTGTAATTCA TTTTGCTTAA ACGAGCATGA ATAAGATTTA 002080
002081 GTTTTGCTAA TAAATAAAAG TTACTTCACT AAGA
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Predicted Small Protein

Name ENST00000511385.1_smProtein_38:127
Length 30
Molecular weight 3083.5998
Aromaticity 0.0689655172414
Instability index 94.8172413793
Isoelectric point 9.18743896484
Runs 5
Runs residual 0.0271551724138
Runs probability 0.0351174704116
Amino acid sequence MPVLPSPKNAYVTSPQTGSSASKLCLQFM
Secondary structure LLLLLLLLLLEELLLLLLHHHHHHHHHHL
PRMN -
PiMo -