ENST00000512779.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000512779.1 |
Source |
Gencode19 |
Same with |
lnc-ALDH7A1-1:3,NONHSAT103580 |
Classification |
antisense |
Length |
477 nt |
Genomic location |
chr5-:125794479..125803323 |
Exon number |
2 |
Exons |
125794479..125794764,125803133..125803323 |
Genome context |
|
Sequence |
000001 ATTTGAATTC ATCACCTCTA CTGATTCCCA TTAATAAATG TTAATGGAAT GGGCAAGGAA ATGATCCGAC CTTTTGAAGA 000080
000081 TCCATGGACT GCAAGCAAAT ATGACGAGTA GGGTGGCTCT ACCCTTGATA ATTTCAAAAG GCACAAGCAA TAAGGGGGTT 000160 000161 CATCTGCATG ACACTGGCCC CTGTGGACAG GGTCTTTAAA ATGAATATGT ACAAAAGAAG TGATAATCCT GCTACAATAA 000240 000241 TGGAGGGAAA CCATCAACAG AAGACTGATT TCTGAAACTT TCTGAAATAT GGAAAAACGG AAAGCGGAAA GTAAAGTACA 000320 000321 ATATTTACTC ATGCAGCAAA GCAAGGGAAG CCATAATCTT GAATATAGGC ATCAACGGGG GATAAGAAAA CACCGACCCG 000400 000401 TTTGTCAGAA GTCCAGTGAG GTGCTACAGG AGGAGTGGGT GAGAAGTTTC CGAAAACACT AGATTTAATT AAAGATG |
Predicted Small Protein
Name | ENST00000512779.1_smProtein_167:274 |
Length | 36 |
Molecular weight | 4115.6938 |
Aromaticity | 0.0857142857143 |
Instability index | 52.7057142857 |
Isoelectric point | 8.21063232422 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.0367602897015 |
Amino acid sequence | MTLAPVDRVFKMNMYKRSDNPATIMEGNHQQKTDF |
Secondary structure | LLLLLLLLLLLLLLEELLLLHHHHLLLLLLLLLLL |
PRMN | - |
PiMo | - |