ENST00000514736.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000514736.1 |
Source |
Gencode19 |
Same with |
lnc-AGA-3:1,NONHSAT099394 |
Classification |
intergenic |
Length |
758 nt |
Genomic location |
chr4-:178824538..178829090 |
Exon number |
2 |
Exons |
178824538..178825102,178828898..178829090 |
Genome context |
|
Sequence |
000001 GGAGAAAAAG AGGAGGAATG GCAAAGGCTG ATTGACTTTG TCAGCTACTT ACTTTAAAAA ACATTTGAGA AAGCCAGAAA 000080
000081 GCAGAGGGGA GGAAGCTCCA CCGTCATGAG AATGGGAAGC AGAGGCAGCG GCAGCGTGCA CAGACATCCT TTGAAGGTTT 000160 000161 GTTATAAACA CAGAAACTGA TGTCTGGGAA AAGGCTGGAG TGCAATGGCG CGATCTCGGC TCACCGCAAC CTCCGCCACC 000240 000241 CAGGTTCAAG CAGTTCTCCT GCCTTTGTCT CCCGAGTAGC TGGGATTACA GGCATGCACC ACCACGCCCG GCTAATTTTG 000320 000321 TATTTTTAGT AGAGACAGGG TTTCTCCATG TTAAGGCTGT TTTCGAACTC CTGACCTCAG GTGATCCGCC CGCCTCGGCC 000400 000401 TCCCAAAGTG CTGGGATTAC AAGCGTGAGC CACTGTGCCC AGCCCAAGCT GTACTTTTAT TTAAGTATAA TTTAGTTAGA 000480 000481 TATGTGAACT CACTGAAAAT GTATACACAA TTTTCTGTGT ATGTATAAAA TTTGATATTT AAATGTATTT ATGGCAAGAG 000560 000561 TATCTGTAAC TTTTATGAAC ATATCAAGTG GACATGATCA CAAAACATGC AATTTATTAC CATAGAGCTT CAGAAATACC 000640 000641 CCTTCCAAAA AGTATGTATA ATGATATGAT ACTTACAATG GAGGCAACTA TGATATTTAA CTGTCAGTAA ACTGAAAGAA 000720 000721 AAAAATGACT CAAAAAGTTT GTAAAGATGA TACCTTTC |
Predicted Small Protein
Name | ENST00000514736.1_smProtein_179:328 |
Length | 50 |
Molecular weight | 5329.0741 |
Aromaticity | 0.0612244897959 |
Instability index | 76.6857142857 |
Isoelectric point | 11.4371948242 |
Runs | 10 |
Runs residual | 0.0420297848869 |
Runs probability | 0.0371135841725 |
Amino acid sequence | MSGKRLECNGAISAHRNLRHPGSSSSPAFVSRVAGITGMHHHARLILYF |
Secondary structure | LLLLEEELLLHHHHHHLLLLLLLLLLHHHHHHHHHHHLLLHHHEEEEEL |
PRMN | - |
PiMo | - |