ENST00000514769.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000514769.1 |
Source |
Gencode19 |
Same with |
lnc-C5orf30-1:1,NONHSAT103073 |
Classification |
intergenic |
Length |
574 nt |
Genomic location |
chr5+:103415612..103441104 |
Exon number |
5 |
Exons |
103415612..103415825,103416609..103416742,103417581..103417648,103439875..103439988,103441061..103441104 |
Genome context |
|
Sequence |
000001 GTTTACCTAA TCAAGCCTGG GCAATGGCGG GTGCCCCTCC TCCAGCCTCG CTGCCGCCTT GCAGTTTGAT CTCAGACTGC 000080
000081 TGTGCTAGCA ATCAGCGAGA CTCCGTGGGC GTAGGACCCT CTGAGCCAGG TGTGGGATAT AATCTCGTGG TGCGCCGTTT 000160 000161 TTTAAGCCCG TCGGAAAAGC ACAGTATTCG GGTGGGAGTG ACCCGATTTT CCAGTTTCAA ACATCTTCAA GGCAGAAACG 000240 000241 TGTTGTATTT GCATGCTGTT TAGAAGGCAG TGTACTGAAT AGTACCAGTT TTTTCAGAGA CAAATATGGT GTACTTATTT 000320 000321 GAAAAGAAAG GATGATACAC ATACATAGCC ATCCAAAAAA TCCTGCAACC AGTAGCAAAT TATATTACAC ATTGGACACA 000400 000401 TCCTAAATGA TGCAAGGTTG CTAATTCTCT CTGTTGGTAA TATCTTTTGA TGCTGTTGTG TCCAGAATTG ATTCATTCCT 000480 000481 GTGGGTTCTT GGTCTCACTG ACTTCAAGAA TAAAGCTGCG GACCCTAGTG TTTCCTGAGG CCTCACTAGA AGCAAATGCT 000560 000561 GGTGCCGTAC TTCT |
Predicted Small Protein
Name | ENST00000514769.1_smProtein_23:262 |
Length | 80 |
Molecular weight | 8419.5753 |
Aromaticity | 0.0632911392405 |
Instability index | 50.2962025316 |
Isoelectric point | 9.41412353516 |
Runs | 9 |
Runs residual | 0.0263568579851 |
Runs probability | 0.0469587234293 |
Amino acid sequence | MAGAPPPASLPPCSLISDCCASNQRDSVGVGPSEPGVGYNLVVRRFLSPSEKHSIRVGVT RFSSFKHLQGRNVLYLHAV |
Secondary structure | LLLLLLLLLLLLLLLLLHHHLLLLLLLLLLLLLLLLLEEEEEEEEEELLLLLLEEEEEEE EEELLLLLLLLLEEEEEEL |
PRMN | - |
PiMo | - |