ENST00000515627.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000515627.2 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
1107 nt |
Genomic location |
chr5+:133842243..133844920 |
Exon number |
2 |
Exons |
133842243..133842525,133844097..133844920 |
Genome context |
|
Sequence |
000001 TGGGGTCATT GGGCTGCCTT AGATTCCCCC CCCCACCTCT CAGCCTGCTG CCTCTGGACA AAGCTCTGCA GAGGAGCCCC 000080
000081 ATCTCCTTCA GCCCCCTCCT GCCTTTGGGG TGCAAGTTTC CTGAAGGACT TGAGTGAGAT GTCACCAAGC AACAGGCTGT 000160 000161 CAGGCTCTTG GCAGCAAGTA CTGGCCCAGC GACTCGCGGC AGAGTCTCTC CTTGGGGCGT CTGTCCTTAT CAGGGGTGGA 000240 000241 TGCTGTCAGA CTTGCTAATG GTGGAATTTC TGGCATGTGG CAGGGCCAAG TGCAGTGGCT CACACCTATA ATCCCAGCAC 000320 000321 TTTGGGAGGC TGAGGCACGA GGATTGCTTG AGCCCAGGAG TTCATCACCA GCCTGGGCAA TATAGCCAGA CCCGGTCTCC 000400 000401 ACAAAAAAAT TTTTAAAAAT TAGCTGGGCA TGGTGGCCTG TGCCTGTAGT CCCAGCTCTT TGGGAGACTG AGGCAGGAGG 000480 000481 ATCAACTTGA GCCCAGAAGG TCGAAGCTGC AGTAAGCCAT GGTCATGCCA GCGGAGTTGA GCCTGGACCA CAGAGCAAGA 000560 000561 CACTATAGGG AAGACAGCCA GGTGAAAATG AAGGCAGAGA CCAGAGTTAT GCATCCGAAA GGCAAGGAAT GCCGGGGGCT 000640 000641 GCCAGAAGCT GGAAGAGGCA AGGCAGGATC CCCCACTAAA GGCCTTGGAG GGAGCATGGC TTTAGCAGCA CCTCAATTTG 000720 000721 GGATGTCTAT TTTCCGGAAC AGCGGGAATA AGTGTCTGCT GCTGTAAGCC ACCCTGCCTG TGGCACTTTG TTACAGCAGC 000800 000801 CCAGGAACCT GACCCAGCCA GGCTGCTCCT GCTGCCCAGT GTGCCCTTCT CTCATCCCTC CAGCTGGTCT CTCACTGCCT 000880 000881 TCGAGCCCCA TCACCTGCTC GGGCTCCCCC TCTGTGTGTC CCCAGTTCTG GACACTTATT CAGCAGACCT GTAAGTTTTG 000960 000961 CTGGCCAGCC TATCTCCCTG GCTAGACTGA AGGCTCCTTC AGGGCAGGCC TAACCTGTGC TAGGGCAGCA TGATGCCTGG 001040 001041 TACAGAATAG GGGCTCCTTA GATGTGGGGT AAATAAAGGA ATGCTCGAAG GGTGATGGGC CCCTGTG |
Predicted Small Protein
Name | ENST00000515627.2_smProtein_518:766 |
Length | 83 |
Molecular weight | 8896.3254 |
Aromaticity | 0.0365853658537 |
Instability index | 66.4414634146 |
Isoelectric point | 10.0221557617 |
Runs | 14 |
Runs residual | 0.034830007391 |
Runs probability | 0.0384775531834 |
Amino acid sequence | MVMPAELSLDHRARHYREDSQVKMKAETRVMHPKGKECRGLPEAGRGKAGSPTKGLGGSM ALAAPQFGMSIFRNSGNKCLLL |
Secondary structure | LLLLEEELHHHHHHHLLLLHHHEEEEEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLHHH HHHLLLLLLEEEELLLLEEEEL |
PRMN | - |
PiMo | - |