ENST00000519364.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000519364.1 |
Source |
Gencode19 |
Same with |
lnc-STC1-3:2,NONHSAT125605 |
Classification |
antisense |
Length |
902 nt |
Genomic location |
chr8-:24347825..24372341 |
Exon number |
5 |
Exons |
24347825..24348019,24349373..24349673,24369184..24369456,24372088..24372177,24372299..24372341 |
Genome context |
|
Sequence |
000001 ATGACATCAG ACTGGGCTTG TGCCTGATAA TTCATTTCTG AAGTGCTTCA AGATTGACGC ATCAGATTTG CACAATGTGC 000080
000081 CACTTTAGGA GATTATTTCT TCCTTCCTTC AGCCAGACAG AAGACTGCAG TAGGGATATG GTTCCTGTTT GCCTATTTCC 000160 000161 ATCCACAACT CTGCCAGAGA CGAAAGCAGT GTTTGAAACA ATTCACCAAG ATTTCCATCT GGAATCATCA AGAATGGAAT 000240 000241 TGATCAAATT CCTTAAGAAA TTTACTTAAA GTCATGATTT TGACAGCCTA GTGCTACCTG GAAAAGGGAC AGCAGCAGCC 000320 000321 TGGAGCAGTT TTCTAGCTAA CAAGAATTTT GTTAGCTATG TGGCCACCTA GTGGCTCTTC CATGGATGTC GCTGATGCAT 000400 000401 TGTCAGGGCA ATAACAGAGA AATAGAGGCC ACCATCTGTG TGAATACTTC ACTGTGATTA TCTCTCACCA TCATCAAATA 000480 000481 GTTCAGAGCA CTGATCCTCA CGAGTTGGAC ATTTCCCCAT GAAACAGTAG CCTTCTGAGT TCTTGCAAGG AAATCCATTG 000560 000561 ACCCTGAACT GGTCCTTAGG ACAGGCAGGC GAGTGGCCAG TGCACATCTC AGGAAAATCA CATTCATCTT TCGCCGGTCT 000640 000641 GCATATGGAC CCTGCTTTTT TTATCTGTTG AGGAAAAACA AAGAGACTAA ATCCTGGATA CATTTAGGGT CATACTGCTT 000720 000721 CCCTGTACTG AAGTGTGATG TGAGACTATT CAACTGCTGA AGATCTGATT TTACCTTTTG CTCAAGCTGT CCATTATTTC 000800 000801 AGGCTGACTT TTATTTTTTA ATGTATCATT AAATAACATC AAAATGGTAA CTTATGCCCT ATTTTCTCAA ACAAAATAAA 000880 000881 AACTCAAAGA AAATGGAGTG TG |
Predicted Small Protein
Name | ENST00000519364.1_smProtein_74:268 |
Length | 65 |
Molecular weight | 7598.8002 |
Aromaticity | 0.125 |
Instability index | 71.2296875 |
Isoelectric point | 6.80987548828 |
Runs | 9 |
Runs residual | 0.00796875 |
Runs probability | 0.0499224714912 |
Amino acid sequence | MCHFRRLFLPSFSQTEDCSRDMVPVCLFPSTTLPETKAVFETIHQDFHLESSRMELIKFL KKFT |
Secondary structure | LLEEEEELLLLLLLLLLLLLLLLEEEELLLLLLLLHHHHHHHHHHHLLLLLLHHHHHHHH HHLL |
PRMN | - |
PiMo | - |