ENST00000520190.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000520190.1 |
Source |
Gencode19 |
Same with |
lnc-BOD1-4:3 |
Classification |
intronic(AS) |
Length |
431 nt |
Genomic location |
chr5-:173509278..173513478 |
Exon number |
2 |
Exons |
173509278..173509630,173513401..173513478 |
Genome context |
|
Sequence |
000001 CAGCTGCACA GCTCCAGACA ATCGTTGTCA AGGACGGGAA TGAGATTCTA ACATGGCTGA TCTGATTTTT CAAGAAAGGT 000080
000081 GAAAGACCCA AATTCATGGA AGAGAAGTGA GTCACACAGG GAGCCAGTGG CAGAGCCACA CCCCACAGAG CAATCAACAT 000160 000161 GCTCTACTCT GCAGACCTGC AACAGGGAGG GAAGCCAGAC TCTGATGCAA GAAGGAAAGA CCATGTGCTG GCTCAGTGTG 000240 000241 TGCAGCCTGG ACTGAGCTAC TGAACTCTAA ATCCAAGGAT GACTAATGTA AGCCTAAAGG GTAATCTGCA AATACTGCTC 000320 000321 CATTAATATT CAATGATAAA TGATATTGCT TTAGAATCAA ATTCACATAA ACAGAAGCTT CAGCTGTATG TCCGCACCCT 000400 000401 GGGAACATTA AATTGTAAGC CACGTCTTGT A |
Predicted Small Protein
Name | ENST00000520190.1_smProtein_158:262 |
Length | 35 |
Molecular weight | 3748.1646 |
Aromaticity | 0.0588235294118 |
Instability index | 42.9 |
Isoelectric point | 6.50286865234 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0283695460166 |
Amino acid sequence | MLYSADLQQGGKPDSDARRKDHVLAQCVQPGLSY |
Secondary structure | LLEELLLLLLLLLLHHHHHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |