ENST00000521666.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000521666.1 |
Source |
Gencode19 |
Same with |
lnc-NUDCD2-1:2,NONHSAT104910 |
Classification |
antisense |
Length |
800 nt |
Genomic location |
chr5-:162910071..162921040 |
Exon number |
2 |
Exons |
162910071..162910278,162920449..162921040 |
Genome context |
|
Sequence |
000001 ACACATTGGT TTCCTTACCT ATGGAGTGAG GGCTATTATG GTGGAAAAGG CCAAGTAGAA GCCACTAGAA CTATCTGTAC 000080
000081 TTAGGAAAAT AGTAAACCAA AAGCAATGCT CAATTCCTAT AGGGACTGAA GAGATTAGTG CCACCATAAG TACTTGAAGG 000160 000161 AAGGCGGGGT GGTGATTCCT ACCATATGTC CATTCAACTC GCCTATTTAG CCTGGGCAGA AGACAGATGG ATTATCACAA 000240 000241 ACTTAACTAG GTGGTGACTC CAATTGCAGC TACAGTACCA GATGTATTGC TTGAGCAAAT TAACACAACT CCTGGTTCCT 000320 000321 GGTATGCAGC TACCTGGTAT GATCTGGCAA ATGCCTTTCT CTCCATCCCT GTCTATAAGG CCGACCAGAA GCAGTTTGCT 000400 000401 TTTAGCTAGC AAGGCTAGAA ATGCACCTTC ATGTCCTACC TCAGGGCATA TCAACTCACC AGCCCTGTCC TAATTTTGTT 000480 000481 CACAGGAATC TTGATTGCCT TTTCTTTCCA CATCACATTG GTCCATTACA TTGACGACAT TATGCTCACT GGACCTAATG 000560 000561 AGTGAGACAT AGCAACTACT CCAGACCTAT TGCTTTTCTG CATGGAAGAA TTAAATTGAG AAAAACATAG TTATTTAAAA 000640 000641 AATCACATCG TAACTGAGTT AACAAGGCAC TCAGGTTCTA ATCATAGATT ACCTTCCTTC TTCATCTTCC AGCTGTTTTC 000720 000721 TAAAGTCTTC CTCCTGTTGC TTGAGTTGGT TCTGCAAATC AGTTATTTTT TGAAGAAAAG AAACTGTGAT TTCTTTAATT 000800 |
Predicted Small Protein
Name | ENST00000521666.1_smProtein_281:472 |
Length | 64 |
Molecular weight | 6784.0047 |
Aromaticity | 0.047619047619 |
Instability index | 85.4936507937 |
Isoelectric point | 10.3208618164 |
Runs | 7 |
Runs residual | 0.0338516358925 |
Runs probability | 0.0470891059126 |
Amino acid sequence | MYCLSKLTQLLVPGMQLPGMIWQMPFSPSLSIRPTRSSLLLASKARNAPSCPTSGHINSP ALS |
Secondary structure | LLHHHHHHHHLLLLLLLLLLEEELLLLLLLLLLLLLLHHHHHHHLLLLLLLLLLLLLLLL LLL |
PRMN | - |
PiMo | - |