ENST00000522106.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000522106.1 |
Source |
Gencode19 |
Same with |
lnc-CYP7B1-1:1,NONHSAT126970 |
Classification |
intergenic |
Length |
875 nt |
Genomic location |
chr8-:65713793..65730130 |
Exon number |
5 |
Exons |
65713793..65714083,65714925..65715042,65716730..65716835,65718146..65718255,65729881..65730130 |
Genome context |
|
Sequence |
000001 GTCACCATAA GCTTTTGATA GGGCTTTTGT CTTTCCCTTT CTCATACATT TTTCTGTCCT AGAGAAAGTG GGAGATTTAA 000080
000081 AAATTATGTA TTCTGTCTTT GCTTGGGTAC TGTGAAGTCA GGTATATTTG TAGAGTTGGG TTAGCGAGGT AGTGACAATT 000160 000161 TCCTTTTAAA GATGTATATC TTCTTTCTCC CCAATTCTTT CCAAAGAAAT TACTGATGCT GAGGAAGATC CTGAGGATAA 000240 000241 AGCAACAAAC GCAGTCTGGA ACCAGTGACA TTAAAGACCT GAACCCTGCA CCTCATCTTG GGACAATTCT AAGGGCTACC 000320 000321 TGAGTTCCAC ATATTATCAA GGACTCAGCT GAATCTTTTG ATGGAAAACT TGAGACCAGC GTCAGAGCTA GACAAGGGCC 000400 000401 ATGGAGGGCC AAGGTCATGG CAGAGCCTCA ATTGTCTCCA CAGGGAGCGG TTATGGACAA CCTAAGAGTC TTGCTCTGTT 000480 000481 GCCTAGGCTG AAGTGAAGTA GTGTGATCTC GGCTCGCCAC AACCTCTGCC TCCCAGGTTC AAGCGATTCT CCTGCCTCAG 000560 000561 CCTCCCGAGT AGCTGGAACT ATAGGTCATC TAGGGGAAAA CAGAAGTATG AGGATTGAGA CTTCTTCTGA AAATCAGTGA 000640 000641 GTGGCTCTCT GCAGTGGTTA CAGAAATGCC CCAGCATGGA CTCCCTCCTG TAAACTGGCT CTGCTGTCCC AGCAGTGACG 000720 000721 GAAAGCACTC AATTTGTTTT CTCTTGGAAG AGACAGAGTG GCTGTCAGTT TACTGCAATA TTTTGGACTG CCTGGAAAAT 000800 000801 TCAATGTACA ACAGGAGAAA GGAGAGGCAG GAGACAGACT CTGGAATAGA AGTCAAAGAC AAAGAGGCTC GTAAA |
Predicted Small Protein
Name | ENST00000522106.1_smProtein_215:322 |
Length | 36 |
Molecular weight | 3915.567 |
Aromaticity | 0.0 |
Instability index | 57.94 |
Isoelectric point | 11.0000610352 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.0128952481894 |
Amino acid sequence | MLRKILRIKQQTQSGTSDIKDLNPAPHLGTILRAT |
Secondary structure | LHHHHHHHHHHLLLLLLLLLLLLLLLLLLLEEELL |
PRMN | - |
PiMo | - |